Hb_004981_010

Information

Type -
Description -
Location Contig4981: 4043-6044
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004981_010 0.0 - - -
2 Hb_003717_020 0.1152623843 - - -
3 Hb_065395_020 0.1570860251 - - receptor-kinase, putative [Ricinus communis]
4 Hb_001021_050 0.223271198 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
5 Hb_001758_030 0.2292906618 - - hypothetical protein JCGZ_09181 [Jatropha curcas]
6 Hb_181402_010 0.2358134574 - - PREDICTED: uncharacterized protein LOC104905886 [Beta vulgaris subsp. vulgaris]
7 Hb_000045_060 0.2494192804 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
8 Hb_143398_020 0.2582635221 - - PREDICTED: 21 kDa protein [Populus euphratica]
9 Hb_118014_010 0.25998197 - - PREDICTED: uncharacterized protein LOC104214283 [Nicotiana sylvestris]
10 Hb_004678_070 0.2791391581 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
11 Hb_004235_020 0.2895064029 - - PREDICTED: uncharacterized protein LOC103322555 [Prunus mume]
12 Hb_176819_010 0.2973236961 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
13 Hb_002996_020 0.3046964613 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
14 Hb_097981_010 0.3123954768 - - -
15 Hb_007193_050 0.313081775 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
16 Hb_027380_250 0.3134617211 - - Isoflavone reductase, putative [Ricinus communis]
17 Hb_001899_020 0.3180349857 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 [Jatropha curcas]
18 Hb_006040_040 0.3219977068 - - Putative mitochondrial protein [Glycine soja]
19 Hb_024468_040 0.3273343079 - - -
20 Hb_098068_010 0.3379753606 - - PREDICTED: putative phospholipid-transporting ATPase 8 [Jatropha curcas]

Gene co-expression network

sample Hb_004981_010 Hb_004981_010 Hb_003717_020 Hb_003717_020 Hb_004981_010--Hb_003717_020 Hb_065395_020 Hb_065395_020 Hb_004981_010--Hb_065395_020 Hb_001021_050 Hb_001021_050 Hb_004981_010--Hb_001021_050 Hb_001758_030 Hb_001758_030 Hb_004981_010--Hb_001758_030 Hb_181402_010 Hb_181402_010 Hb_004981_010--Hb_181402_010 Hb_000045_060 Hb_000045_060 Hb_004981_010--Hb_000045_060 Hb_003717_020--Hb_181402_010 Hb_003717_020--Hb_065395_020 Hb_003717_020--Hb_001021_050 Hb_003717_020--Hb_000045_060 Hb_111985_030 Hb_111985_030 Hb_003717_020--Hb_111985_030 Hb_004235_020 Hb_004235_020 Hb_065395_020--Hb_004235_020 Hb_143398_020 Hb_143398_020 Hb_065395_020--Hb_143398_020 Hb_009888_010 Hb_009888_010 Hb_065395_020--Hb_009888_010 Hb_004678_070 Hb_004678_070 Hb_065395_020--Hb_004678_070 Hb_012538_010 Hb_012538_010 Hb_001021_050--Hb_012538_010 Hb_001021_050--Hb_143398_020 Hb_132317_010 Hb_132317_010 Hb_001021_050--Hb_132317_010 Hb_133047_030 Hb_133047_030 Hb_001021_050--Hb_133047_030 Hb_097981_010 Hb_097981_010 Hb_001758_030--Hb_097981_010 Hb_001758_030--Hb_004678_070 Hb_001758_030--Hb_181402_010 Hb_105123_020 Hb_105123_020 Hb_001758_030--Hb_105123_020 Hb_001758_030--Hb_003717_020 Hb_055314_010 Hb_055314_010 Hb_181402_010--Hb_055314_010 Hb_042463_050 Hb_042463_050 Hb_181402_010--Hb_042463_050 Hb_027204_010 Hb_027204_010 Hb_181402_010--Hb_027204_010 Hb_118014_010 Hb_118014_010 Hb_000045_060--Hb_118014_010 Hb_027380_250 Hb_027380_250 Hb_000045_060--Hb_027380_250 Hb_007193_050 Hb_007193_050 Hb_000045_060--Hb_007193_050 Hb_065661_010 Hb_065661_010 Hb_000045_060--Hb_065661_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0778732 0 0 0 0.0602743
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.147704

CAGE analysis