Hb_000149_090

Information

Type -
Description -
Location Contig149: 165643-167355
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000149_090 0.0 - - -
2 Hb_009510_060 0.0758461515 - - -
3 Hb_010926_030 0.0777200418 - - hypothetical protein CISIN_1g037967mg, partial [Citrus sinensis]
4 Hb_121441_010 0.1100066014 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
5 Hb_000644_040 0.1276323964 desease resistance Gene Name: NB-ARC hypothetical protein VITISV_009157 [Vitis vinifera]
6 Hb_002566_010 0.1289347821 - - PREDICTED: uncharacterized protein LOC105643984 isoform X1 [Jatropha curcas]
7 Hb_008692_020 0.1312362859 - - -
8 Hb_064482_010 0.1349818545 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_002555_030 0.1368157147 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Malus domestica]
10 Hb_031931_030 0.1385147272 - - lipid binding protein, putative [Ricinus communis]
11 Hb_004712_020 0.1414131962 - - hypothetical protein JCGZ_00782 [Jatropha curcas]
12 Hb_029769_010 0.1418916523 - - PREDICTED: putative disease resistance protein RGA3 isoform X3 [Populus euphratica]
13 Hb_002122_040 0.1425789438 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
14 Hb_059780_010 0.1428087541 - - PREDICTED: uncharacterized protein LOC104885482, partial [Beta vulgaris subsp. vulgaris]
15 Hb_010761_030 0.1454665874 - - cytochrome P450, putative [Ricinus communis]
16 Hb_001105_200 0.1493684886 - - catalytic, putative [Ricinus communis]
17 Hb_012807_140 0.1552243059 transcription factor TF Family: MYB hypothetical protein POPTR_0009s01270g [Populus trichocarpa]
18 Hb_000608_450 0.1583756122 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
19 Hb_132515_010 0.1588793475 - - phosphoprotein phosphatase, putative [Ricinus communis]
20 Hb_145211_010 0.1618127661 - - hypothetical protein M569_05648, partial [Genlisea aurea]

Gene co-expression network

sample Hb_000149_090 Hb_000149_090 Hb_009510_060 Hb_009510_060 Hb_000149_090--Hb_009510_060 Hb_010926_030 Hb_010926_030 Hb_000149_090--Hb_010926_030 Hb_121441_010 Hb_121441_010 Hb_000149_090--Hb_121441_010 Hb_000644_040 Hb_000644_040 Hb_000149_090--Hb_000644_040 Hb_002566_010 Hb_002566_010 Hb_000149_090--Hb_002566_010 Hb_008692_020 Hb_008692_020 Hb_000149_090--Hb_008692_020 Hb_009510_060--Hb_010926_030 Hb_004712_020 Hb_004712_020 Hb_009510_060--Hb_004712_020 Hb_012807_140 Hb_012807_140 Hb_009510_060--Hb_012807_140 Hb_064482_010 Hb_064482_010 Hb_009510_060--Hb_064482_010 Hb_002122_040 Hb_002122_040 Hb_009510_060--Hb_002122_040 Hb_010926_030--Hb_004712_020 Hb_010926_030--Hb_012807_140 Hb_001105_200 Hb_001105_200 Hb_010926_030--Hb_001105_200 Hb_010926_030--Hb_002122_040 Hb_059780_010 Hb_059780_010 Hb_121441_010--Hb_059780_010 Hb_000982_120 Hb_000982_120 Hb_121441_010--Hb_000982_120 Hb_000675_040 Hb_000675_040 Hb_121441_010--Hb_000675_040 Hb_145211_010 Hb_145211_010 Hb_121441_010--Hb_145211_010 Hb_121441_010--Hb_002566_010 Hb_002555_030 Hb_002555_030 Hb_000644_040--Hb_002555_030 Hb_000644_040--Hb_064482_010 Hb_002997_050 Hb_002997_050 Hb_000644_040--Hb_002997_050 Hb_132515_010 Hb_132515_010 Hb_000644_040--Hb_132515_010 Hb_000644_040--Hb_121441_010 Hb_002566_010--Hb_000982_120 Hb_031931_030 Hb_031931_030 Hb_002566_010--Hb_031931_030 Hb_002566_010--Hb_059780_010 Hb_002566_010--Hb_145211_010 Hb_010761_030 Hb_010761_030 Hb_002566_010--Hb_010761_030 Hb_008692_020--Hb_004712_020 Hb_008692_020--Hb_010761_030 Hb_008692_020--Hb_031931_030 Hb_008692_020--Hb_002122_040 Hb_002870_010 Hb_002870_010 Hb_008692_020--Hb_002870_010 Hb_008692_020--Hb_001105_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.157483 0 0.134003 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.5926 0.186222

CAGE analysis