Hb_064482_010

Information

Type -
Description -
Location Contig64482: 38-1772
Sequence    

Annotation

kegg
ID rcu:RCOM_0685770
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.23 1.3.1.74)
nr
ID XP_002526809.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID B9SLE0
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0685770 PE=3 SV=1
Gene Ontology
ID GO:0016020
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_064482_010 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_002997_050 0.0815471635 - - PREDICTED: receptor-like protein 12 isoform X4 [Populus euphratica]
3 Hb_000644_040 0.0868086627 desease resistance Gene Name: NB-ARC hypothetical protein VITISV_009157 [Vitis vinifera]
4 Hb_132515_010 0.1151520927 - - phosphoprotein phosphatase, putative [Ricinus communis]
5 Hb_004713_050 0.1195809139 - - RecName: Full=Beta-amyrin synthase [Betula platyphylla]
6 Hb_009510_060 0.1275129024 - - -
7 Hb_002555_030 0.1331857112 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Malus domestica]
8 Hb_018212_020 0.1338111336 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
9 Hb_000149_090 0.1349818545 - - -
10 Hb_054865_030 0.1353624894 - - -
11 Hb_010926_030 0.1457926773 - - hypothetical protein CISIN_1g037967mg, partial [Citrus sinensis]
12 Hb_006326_030 0.1458101528 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000608_450 0.1485438454 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
14 Hb_010813_030 0.15042314 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
15 Hb_121441_010 0.1527151308 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
16 Hb_001611_010 0.1665402683 - - scab resistance family protein [Populus trichocarpa]
17 Hb_000740_130 0.1694600447 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
18 Hb_006120_030 0.1801502019 - - -
19 Hb_000844_100 0.1833777526 - - hypothetical protein JCGZ_04351 [Jatropha curcas]
20 Hb_003060_080 0.1850570367 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_064482_010 Hb_064482_010 Hb_002997_050 Hb_002997_050 Hb_064482_010--Hb_002997_050 Hb_000644_040 Hb_000644_040 Hb_064482_010--Hb_000644_040 Hb_132515_010 Hb_132515_010 Hb_064482_010--Hb_132515_010 Hb_004713_050 Hb_004713_050 Hb_064482_010--Hb_004713_050 Hb_009510_060 Hb_009510_060 Hb_064482_010--Hb_009510_060 Hb_002555_030 Hb_002555_030 Hb_064482_010--Hb_002555_030 Hb_002997_050--Hb_000644_040 Hb_002997_050--Hb_004713_050 Hb_018212_020 Hb_018212_020 Hb_002997_050--Hb_018212_020 Hb_002997_050--Hb_002555_030 Hb_010813_030 Hb_010813_030 Hb_002997_050--Hb_010813_030 Hb_000644_040--Hb_002555_030 Hb_000149_090 Hb_000149_090 Hb_000644_040--Hb_000149_090 Hb_000644_040--Hb_132515_010 Hb_121441_010 Hb_121441_010 Hb_000644_040--Hb_121441_010 Hb_054865_030 Hb_054865_030 Hb_132515_010--Hb_054865_030 Hb_132515_010--Hb_018212_020 Hb_000740_130 Hb_000740_130 Hb_132515_010--Hb_000740_130 Hb_003060_080 Hb_003060_080 Hb_132515_010--Hb_003060_080 Hb_006326_030 Hb_006326_030 Hb_132515_010--Hb_006326_030 Hb_000866_390 Hb_000866_390 Hb_004713_050--Hb_000866_390 Hb_000059_080 Hb_000059_080 Hb_004713_050--Hb_000059_080 Hb_022108_010 Hb_022108_010 Hb_004713_050--Hb_022108_010 Hb_007320_020 Hb_007320_020 Hb_004713_050--Hb_007320_020 Hb_010926_030 Hb_010926_030 Hb_009510_060--Hb_010926_030 Hb_009510_060--Hb_000149_090 Hb_004712_020 Hb_004712_020 Hb_009510_060--Hb_004712_020 Hb_012807_140 Hb_012807_140 Hb_009510_060--Hb_012807_140 Hb_002122_040 Hb_002122_040 Hb_009510_060--Hb_002122_040 Hb_002555_030--Hb_000149_090 Hb_006651_010 Hb_006651_010 Hb_002555_030--Hb_006651_010 Hb_002555_030--Hb_018212_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0538711 0 0.0188935 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0946496 0.0453629

CAGE analysis