Hb_015978_050

Information

Type -
Description -
Location Contig15978: 28636-30967
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_015978_050 0.0 - - -
2 Hb_000236_450 0.1967868505 - - coated vesicle membrane protein, putative [Ricinus communis]
3 Hb_016734_030 0.2098333166 - - -
4 Hb_001496_080 0.2142586536 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
5 Hb_005511_090 0.2449363051 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 C isoform X1 [Jatropha curcas]
6 Hb_032258_010 0.2524019638 - - hypothetical protein POPTR_0013s025001g, partial [Populus trichocarpa]
7 Hb_001341_020 0.2528145499 - - Uncharacterised protein [Bordetella pertussis]
8 Hb_030131_030 0.2541659172 - - PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Jatropha curcas]
9 Hb_022958_010 0.2555511177 - - PREDICTED: probable disease resistance protein At4g27220 [Populus euphratica]
10 Hb_004724_410 0.2572156519 - - PREDICTED: ruvB-like protein 1 isoform X2 [Jatropha curcas]
11 Hb_004984_080 0.2574455477 - - PREDICTED: chitin elicitor receptor kinase 1 isoform X1 [Jatropha curcas]
12 Hb_011639_040 0.2598290302 - - hypothetical protein M569_08265, partial [Genlisea aurea]
13 Hb_001188_120 0.2599124459 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
14 Hb_002631_250 0.2611758253 - - PREDICTED: pentatricopeptide repeat-containing protein At3g20730 [Jatropha curcas]
15 Hb_006618_050 0.261303166 - - PREDICTED: elongation factor G-2, chloroplastic [Jatropha curcas]
16 Hb_085083_020 0.2618821303 - - PREDICTED: receptor-like protein kinase THESEUS 1 [Jatropha curcas]
17 Hb_001623_280 0.261886296 - - PREDICTED: chaperonin CPN60-2, mitochondrial [Jatropha curcas]
18 Hb_002226_050 0.2619663081 - - PREDICTED: uncharacterized protein LOC105641366 isoform X1 [Jatropha curcas]
19 Hb_000215_160 0.2632963296 - - PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X1 [Jatropha curcas]
20 Hb_000010_290 0.2661457863 - - -

Gene co-expression network

sample Hb_015978_050 Hb_015978_050 Hb_000236_450 Hb_000236_450 Hb_015978_050--Hb_000236_450 Hb_016734_030 Hb_016734_030 Hb_015978_050--Hb_016734_030 Hb_001496_080 Hb_001496_080 Hb_015978_050--Hb_001496_080 Hb_005511_090 Hb_005511_090 Hb_015978_050--Hb_005511_090 Hb_032258_010 Hb_032258_010 Hb_015978_050--Hb_032258_010 Hb_001341_020 Hb_001341_020 Hb_015978_050--Hb_001341_020 Hb_011616_020 Hb_011616_020 Hb_000236_450--Hb_011616_020 Hb_008123_010 Hb_008123_010 Hb_000236_450--Hb_008123_010 Hb_031658_040 Hb_031658_040 Hb_000236_450--Hb_031658_040 Hb_002518_120 Hb_002518_120 Hb_000236_450--Hb_002518_120 Hb_003805_070 Hb_003805_070 Hb_000236_450--Hb_003805_070 Hb_002368_070 Hb_002368_070 Hb_000236_450--Hb_002368_070 Hb_016748_010 Hb_016748_010 Hb_016734_030--Hb_016748_010 Hb_093824_010 Hb_093824_010 Hb_016734_030--Hb_093824_010 Hb_001188_120 Hb_001188_120 Hb_016734_030--Hb_001188_120 Hb_000487_190 Hb_000487_190 Hb_016734_030--Hb_000487_190 Hb_000111_110 Hb_000111_110 Hb_016734_030--Hb_000111_110 Hb_154141_010 Hb_154141_010 Hb_001496_080--Hb_154141_010 Hb_002047_020 Hb_002047_020 Hb_001496_080--Hb_002047_020 Hb_085083_020 Hb_085083_020 Hb_001496_080--Hb_085083_020 Hb_022958_010 Hb_022958_010 Hb_001496_080--Hb_022958_010 Hb_001496_080--Hb_000236_450 Hb_012753_010 Hb_012753_010 Hb_005511_090--Hb_012753_010 Hb_000608_200 Hb_000608_200 Hb_005511_090--Hb_000608_200 Hb_000054_110 Hb_000054_110 Hb_005511_090--Hb_000054_110 Hb_005731_150 Hb_005731_150 Hb_005511_090--Hb_005731_150 Hb_005511_090--Hb_000236_450 Hb_001427_040 Hb_001427_040 Hb_032258_010--Hb_001427_040 Hb_032258_010--Hb_002518_120 Hb_002282_070 Hb_002282_070 Hb_032258_010--Hb_002282_070 Hb_000220_210 Hb_000220_210 Hb_032258_010--Hb_000220_210 Hb_002542_160 Hb_002542_160 Hb_032258_010--Hb_002542_160 Hb_155832_010 Hb_155832_010 Hb_032258_010--Hb_155832_010 Hb_005396_060 Hb_005396_060 Hb_001341_020--Hb_005396_060 Hb_002226_050 Hb_002226_050 Hb_001341_020--Hb_002226_050 Hb_006452_240 Hb_006452_240 Hb_001341_020--Hb_006452_240 Hb_000022_140 Hb_000022_140 Hb_001341_020--Hb_000022_140 Hb_131872_010 Hb_131872_010 Hb_001341_020--Hb_131872_010 Hb_148593_010 Hb_148593_010 Hb_001341_020--Hb_148593_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.129915 0.0711359 0.131115 0.023744 0.253711 0.0827647
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.109816 0.154139 0.493828 0.686294

CAGE analysis