Hb_085083_020

Information

Type -
Description -
Location Contig85083: 11824-15298
Sequence    

Annotation

kegg
ID rcu:RCOM_0240950
description ATP binding protein, putative
nr
ID XP_012070636.1
description PREDICTED: receptor-like protein kinase THESEUS 1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9T9S4
description ATP binding protein, putative (Fragment) OS=Ricinus communis GN=RCOM_0240950 PE=4 SV=1
Gene Ontology
ID GO:0009506
description receptor-like protein kinase theseus 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_085083_020 0.0 - - PREDICTED: receptor-like protein kinase THESEUS 1 [Jatropha curcas]
2 Hb_003175_110 0.2029726244 - - -
3 Hb_000964_070 0.2057804278 - - PREDICTED: ATP synthase subunit O, mitochondrial [Jatropha curcas]
4 Hb_066487_010 0.2085495831 - - conserved hypothetical protein [Ricinus communis]
5 Hb_063943_010 0.2112749259 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
6 Hb_005523_010 0.2119716232 transcription factor TF Family: PHD PREDICTED: helicase protein MOM1-like [Jatropha curcas]
7 Hb_090530_010 0.2222234191 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]
8 Hb_001461_020 0.2233817441 - - PREDICTED: uncharacterized protein LOC104901272 [Beta vulgaris subsp. vulgaris]
9 Hb_000529_140 0.2266299217 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003805_070 0.228079084 - - PREDICTED: sacsin [Jatropha curcas]
11 Hb_000236_450 0.230009857 - - coated vesicle membrane protein, putative [Ricinus communis]
12 Hb_001188_120 0.2332488196 - - hypothetical protein JCGZ_05575 [Jatropha curcas]
13 Hb_010757_030 0.2344873269 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
14 Hb_001341_020 0.2348192948 - - Uncharacterised protein [Bordetella pertussis]
15 Hb_001496_080 0.237222613 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
16 Hb_003878_080 0.2386381679 - - PREDICTED: uncharacterized protein LOC105637045 [Jatropha curcas]
17 Hb_000404_040 0.2391068096 - - conserved hypothetical protein [Ricinus communis]
18 Hb_011616_020 0.2412146948 - - hypothetical protein CICLE_v10004968mg [Citrus clementina]
19 Hb_012098_070 0.2412905727 - - PREDICTED: uncharacterized protein LOC105633371 [Jatropha curcas]
20 Hb_008123_010 0.241791977 - - -

Gene co-expression network

sample Hb_085083_020 Hb_085083_020 Hb_003175_110 Hb_003175_110 Hb_085083_020--Hb_003175_110 Hb_000964_070 Hb_000964_070 Hb_085083_020--Hb_000964_070 Hb_066487_010 Hb_066487_010 Hb_085083_020--Hb_066487_010 Hb_063943_010 Hb_063943_010 Hb_085083_020--Hb_063943_010 Hb_005523_010 Hb_005523_010 Hb_085083_020--Hb_005523_010 Hb_090530_010 Hb_090530_010 Hb_085083_020--Hb_090530_010 Hb_003175_110--Hb_063943_010 Hb_113673_010 Hb_113673_010 Hb_003175_110--Hb_113673_010 Hb_001266_120 Hb_001266_120 Hb_003175_110--Hb_001266_120 Hb_146339_010 Hb_146339_010 Hb_003175_110--Hb_146339_010 Hb_003124_030 Hb_003124_030 Hb_003175_110--Hb_003124_030 Hb_004984_080 Hb_004984_080 Hb_000964_070--Hb_004984_080 Hb_000941_150 Hb_000941_150 Hb_000964_070--Hb_000941_150 Hb_003211_030 Hb_003211_030 Hb_000964_070--Hb_003211_030 Hb_000676_200 Hb_000676_200 Hb_000964_070--Hb_000676_200 Hb_000964_070--Hb_066487_010 Hb_012098_070 Hb_012098_070 Hb_066487_010--Hb_012098_070 Hb_020665_010 Hb_020665_010 Hb_066487_010--Hb_020665_010 Hb_001005_050 Hb_001005_050 Hb_066487_010--Hb_001005_050 Hb_007820_010 Hb_007820_010 Hb_066487_010--Hb_007820_010 Hb_003467_030 Hb_003467_030 Hb_066487_010--Hb_003467_030 Hb_006274_050 Hb_006274_050 Hb_066487_010--Hb_006274_050 Hb_063943_010--Hb_146339_010 Hb_003059_010 Hb_003059_010 Hb_063943_010--Hb_003059_010 Hb_089206_010 Hb_089206_010 Hb_063943_010--Hb_089206_010 Hb_183443_010 Hb_183443_010 Hb_063943_010--Hb_183443_010 Hb_063943_010--Hb_003124_030 Hb_011616_020 Hb_011616_020 Hb_005523_010--Hb_011616_020 Hb_005250_030 Hb_005250_030 Hb_005523_010--Hb_005250_030 Hb_010757_030 Hb_010757_030 Hb_005523_010--Hb_010757_030 Hb_002986_070 Hb_002986_070 Hb_005523_010--Hb_002986_070 Hb_000529_140 Hb_000529_140 Hb_005523_010--Hb_000529_140 Hb_013459_010 Hb_013459_010 Hb_005523_010--Hb_013459_010 Hb_008092_080 Hb_008092_080 Hb_090530_010--Hb_008092_080 Hb_002740_190 Hb_002740_190 Hb_090530_010--Hb_002740_190 Hb_024714_080 Hb_024714_080 Hb_090530_010--Hb_024714_080 Hb_028707_110 Hb_028707_110 Hb_090530_010--Hb_028707_110 Hb_008123_010 Hb_008123_010 Hb_090530_010--Hb_008123_010 Hb_003077_130 Hb_003077_130 Hb_090530_010--Hb_003077_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.795395 0.444421 0.337365 0.380595 0.780024 0.314086
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.152131 0 1.28679 1.19003 3.68613

CAGE analysis