Hb_008123_010

Information

Type -
Description -
Location Contig8123: 380-1268
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008123_010 0.0 - - -
2 Hb_090530_010 0.1473023527 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]
3 Hb_011616_020 0.153940048 - - hypothetical protein CICLE_v10004968mg [Citrus clementina]
4 Hb_031658_040 0.1609181396 - - -
5 Hb_002276_070 0.163706317 - - PREDICTED: heat shock protein 83 [Jatropha curcas]
6 Hb_007313_100 0.1662546111 desease resistance Gene Name: NB-ARC Disease resistance protein RPS2, putative [Ricinus communis]
7 Hb_002495_060 0.1739197878 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
8 Hb_000236_450 0.1746258179 - - coated vesicle membrane protein, putative [Ricinus communis]
9 Hb_000599_230 0.1752980543 - - -
10 Hb_002368_070 0.1769755283 - - PREDICTED: uncharacterized protein LOC105634087 [Jatropha curcas]
11 Hb_003058_020 0.1783769141 - - PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Jatropha curcas]
12 Hb_008092_080 0.1800244324 - - elongation factor ts, putative [Ricinus communis]
13 Hb_011931_060 0.1805795928 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Jatropha curcas]
14 Hb_005250_030 0.1805832034 - - PREDICTED: uncharacterized protein LOC105640177 [Jatropha curcas]
15 Hb_006618_050 0.1826400363 - - PREDICTED: elongation factor G-2, chloroplastic [Jatropha curcas]
16 Hb_143629_060 0.1836680948 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Jatropha curcas]
17 Hb_154141_010 0.1867622929 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
18 Hb_000330_080 0.1867726432 - - auxilin, putative [Ricinus communis]
19 Hb_001009_100 0.1872802959 - - -
20 Hb_004785_070 0.1905840743 - - PREDICTED: serine/threonine-protein kinase HT1-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_008123_010 Hb_008123_010 Hb_090530_010 Hb_090530_010 Hb_008123_010--Hb_090530_010 Hb_011616_020 Hb_011616_020 Hb_008123_010--Hb_011616_020 Hb_031658_040 Hb_031658_040 Hb_008123_010--Hb_031658_040 Hb_002276_070 Hb_002276_070 Hb_008123_010--Hb_002276_070 Hb_007313_100 Hb_007313_100 Hb_008123_010--Hb_007313_100 Hb_002495_060 Hb_002495_060 Hb_008123_010--Hb_002495_060 Hb_008092_080 Hb_008092_080 Hb_090530_010--Hb_008092_080 Hb_002740_190 Hb_002740_190 Hb_090530_010--Hb_002740_190 Hb_024714_080 Hb_024714_080 Hb_090530_010--Hb_024714_080 Hb_028707_110 Hb_028707_110 Hb_090530_010--Hb_028707_110 Hb_003077_130 Hb_003077_130 Hb_090530_010--Hb_003077_130 Hb_005250_030 Hb_005250_030 Hb_011616_020--Hb_005250_030 Hb_005523_010 Hb_005523_010 Hb_011616_020--Hb_005523_010 Hb_000062_450 Hb_000062_450 Hb_011616_020--Hb_000062_450 Hb_156279_010 Hb_156279_010 Hb_011616_020--Hb_156279_010 Hb_003632_030 Hb_003632_030 Hb_011616_020--Hb_003632_030 Hb_000815_170 Hb_000815_170 Hb_011616_020--Hb_000815_170 Hb_006618_050 Hb_006618_050 Hb_031658_040--Hb_006618_050 Hb_002368_070 Hb_002368_070 Hb_031658_040--Hb_002368_070 Hb_065408_010 Hb_065408_010 Hb_031658_040--Hb_065408_010 Hb_003506_050 Hb_003506_050 Hb_031658_040--Hb_003506_050 Hb_001366_160 Hb_001366_160 Hb_031658_040--Hb_001366_160 Hb_015026_080 Hb_015026_080 Hb_031658_040--Hb_015026_080 Hb_001437_120 Hb_001437_120 Hb_002276_070--Hb_001437_120 Hb_002276_070--Hb_002495_060 Hb_002276_070--Hb_002368_070 Hb_002276_070--Hb_028707_110 Hb_004785_070 Hb_004785_070 Hb_002276_070--Hb_004785_070 Hb_010488_010 Hb_010488_010 Hb_002276_070--Hb_010488_010 Hb_137276_010 Hb_137276_010 Hb_007313_100--Hb_137276_010 Hb_011931_060 Hb_011931_060 Hb_007313_100--Hb_011931_060 Hb_003058_020 Hb_003058_020 Hb_007313_100--Hb_003058_020 Hb_007313_110 Hb_007313_110 Hb_007313_100--Hb_007313_110 Hb_143629_060 Hb_143629_060 Hb_007313_100--Hb_143629_060 Hb_004987_070 Hb_004987_070 Hb_007313_100--Hb_004987_070 Hb_000479_170 Hb_000479_170 Hb_002495_060--Hb_000479_170 Hb_002495_060--Hb_001437_120 Hb_002495_060--Hb_010488_010 Hb_002495_060--Hb_028707_110 Hb_002495_060--Hb_002368_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.36506 1.0327 0.630444 1.02956 2.85749 2.78837
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.583554 0.229419 0.686028 2.07153 8.61004

CAGE analysis