Hb_000815_170

Information

Type -
Description -
Location Contig815: 210307-227535
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa000255mg
description hypothetical protein
nr
ID XP_012067683.1
description PREDICTED: uncharacterized protein PFB0145c [Jatropha curcas]
swissprot
ID Q8CH18
description Cell division cycle and apoptosis regulator protein 1 OS=Mus musculus GN=Ccar1 PE=1 SV=1
trembl
ID A0A067L221
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15635 PE=4 SV=1
Gene Ontology
ID GO:0005509
description cell division cycle and apoptosis regulator protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59360: 210305-227501 , PASA_asmbl_59361: 211153-211290
cDNA
(Sanger)
(ID:Location)		 012_C16.ab1: 225302-226584

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000815_170 0.0 - - PREDICTED: uncharacterized protein PFB0145c [Jatropha curcas]
2 Hb_156279_010 0.0526986794 transcription factor TF Family: Jumonji PREDICTED: uncharacterized protein LOC105641053 isoform X1 [Jatropha curcas]
3 Hb_005801_020 0.0581060414 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 [Jatropha curcas]
4 Hb_135572_010 0.0756102114 - - GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
5 Hb_005250_030 0.0782743205 - - PREDICTED: uncharacterized protein LOC105640177 [Jatropha curcas]
6 Hb_001623_280 0.080520604 - - PREDICTED: chaperonin CPN60-2, mitochondrial [Jatropha curcas]
7 Hb_000714_040 0.0813221195 - - PREDICTED: uncharacterized protein LOC105634664 isoform X2 [Jatropha curcas]
8 Hb_000661_030 0.0841981151 - - PREDICTED: uncharacterized protein LOC105650374 [Jatropha curcas]
9 Hb_003020_030 0.0848853818 - - PREDICTED: protein TOC75-3, chloroplastic-like [Populus euphratica]
10 Hb_013459_010 0.0875694415 - - PREDICTED: uncharacterized protein LOC101491556 isoform X2 [Cicer arietinum]
11 Hb_012098_070 0.088462049 - - PREDICTED: uncharacterized protein LOC105633371 [Jatropha curcas]
12 Hb_006295_020 0.0890336798 - - PREDICTED: serine/threonine-protein kinase ATR isoform X1 [Jatropha curcas]
13 Hb_005488_170 0.089064668 - - PREDICTED: septin and tuftelin-interacting protein 1 homolog 1 [Jatropha curcas]
14 Hb_006618_050 0.0892488149 - - PREDICTED: elongation factor G-2, chloroplastic [Jatropha curcas]
15 Hb_000608_300 0.0934175673 - - PREDICTED: protein KRI1 homolog [Jatropha curcas]
16 Hb_000925_090 0.0936361572 - - PREDICTED: uncharacterized protein LOC105635805 isoform X1 [Jatropha curcas]
17 Hb_000331_560 0.0936774782 transcription factor TF Family: C2H2 PREDICTED: lysine-specific demethylase REF6 [Jatropha curcas]
18 Hb_007994_010 0.0937412826 transcription factor TF Family: FAR1 PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3 isoform X1 [Jatropha curcas]
19 Hb_000033_110 0.093992816 - - hypothetical protein JCGZ_19253 [Jatropha curcas]
20 Hb_188126_010 0.0940820483 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ25-like isoform X3 [Jatropha curcas]

Gene co-expression network

sample Hb_000815_170 Hb_000815_170 Hb_156279_010 Hb_156279_010 Hb_000815_170--Hb_156279_010 Hb_005801_020 Hb_005801_020 Hb_000815_170--Hb_005801_020 Hb_135572_010 Hb_135572_010 Hb_000815_170--Hb_135572_010 Hb_005250_030 Hb_005250_030 Hb_000815_170--Hb_005250_030 Hb_001623_280 Hb_001623_280 Hb_000815_170--Hb_001623_280 Hb_000714_040 Hb_000714_040 Hb_000815_170--Hb_000714_040 Hb_156279_010--Hb_005801_020 Hb_156279_010--Hb_005250_030 Hb_099270_030 Hb_099270_030 Hb_156279_010--Hb_099270_030 Hb_006618_050 Hb_006618_050 Hb_156279_010--Hb_006618_050 Hb_006295_020 Hb_006295_020 Hb_156279_010--Hb_006295_020 Hb_005801_020--Hb_135572_010 Hb_000661_030 Hb_000661_030 Hb_005801_020--Hb_000661_030 Hb_012098_070 Hb_012098_070 Hb_005801_020--Hb_012098_070 Hb_005801_020--Hb_006618_050 Hb_007994_010 Hb_007994_010 Hb_135572_010--Hb_007994_010 Hb_001377_100 Hb_001377_100 Hb_135572_010--Hb_001377_100 Hb_004143_160 Hb_004143_160 Hb_135572_010--Hb_004143_160 Hb_000358_050 Hb_000358_050 Hb_135572_010--Hb_000358_050 Hb_000363_300 Hb_000363_300 Hb_135572_010--Hb_000363_300 Hb_000922_030 Hb_000922_030 Hb_135572_010--Hb_000922_030 Hb_007545_130 Hb_007545_130 Hb_005250_030--Hb_007545_130 Hb_013459_010 Hb_013459_010 Hb_005250_030--Hb_013459_010 Hb_005250_030--Hb_006618_050 Hb_003506_050 Hb_003506_050 Hb_005250_030--Hb_003506_050 Hb_000608_300 Hb_000608_300 Hb_001623_280--Hb_000608_300 Hb_026053_040 Hb_026053_040 Hb_001623_280--Hb_026053_040 Hb_000025_270 Hb_000025_270 Hb_001623_280--Hb_000025_270 Hb_004306_030 Hb_004306_030 Hb_001623_280--Hb_004306_030 Hb_004724_410 Hb_004724_410 Hb_001623_280--Hb_004724_410 Hb_005488_170 Hb_005488_170 Hb_000714_040--Hb_005488_170 Hb_000714_040--Hb_013459_010 Hb_003119_080 Hb_003119_080 Hb_000714_040--Hb_003119_080 Hb_000714_040--Hb_099270_030 Hb_005348_010 Hb_005348_010 Hb_000714_040--Hb_005348_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.4846 20.2567 12.9688 13.9574 23.2062 26.2182
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.79668 11.4963 16.0973 27.5685 49.0141

CAGE analysis