Hb_137276_010

Information

Type -
Description -
Location Contig137276: 2-679
Sequence    

Annotation

kegg
ID rcu:RCOM_1617400
description Aspartic proteinase nepenthesin-1 precursor, putative
nr
ID XP_002511962.1
description Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
swissprot
ID Q9LS40
description Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1
trembl
ID B9RE23
description Aspartic proteinase nepenthesin-1, putative OS=Ricinus communis GN=RCOM_1617400 PE=4 SV=1
Gene Ontology
ID GO:0004190
description protein aspartic protease in guard cell 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_137276_010 0.0 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
2 Hb_007313_100 0.1017257984 desease resistance Gene Name: NB-ARC Disease resistance protein RPS2, putative [Ricinus communis]
3 Hb_011931_060 0.1109868688 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP62-like [Jatropha curcas]
4 Hb_004545_170 0.1377379963 - - PREDICTED: autophagy-related protein 18h [Jatropha curcas]
5 Hb_003058_020 0.1515539191 - - PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Jatropha curcas]
6 Hb_022250_100 0.1521222961 - - calnexin, putative [Ricinus communis]
7 Hb_002092_110 0.152748743 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
8 Hb_000061_020 0.1552381384 - - PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Jatropha curcas]
9 Hb_000479_170 0.1556451638 - - chaperone clpb, putative [Ricinus communis]
10 Hb_004738_110 0.1583999488 - - phosphoenolpyruvate carboxylase [Manihot esculenta]
11 Hb_004987_070 0.1585347922 - - PREDICTED: heat shock 70 kDa protein 17-like isoform X1 [Jatropha curcas]
12 Hb_000958_070 0.1592277637 - - hypothetical protein PRUPE_ppa007681mg [Prunus persica]
13 Hb_000816_100 0.159701523 - - PREDICTED: APO protein 1, chloroplastic isoform X1 [Jatropha curcas]
14 Hb_006355_020 0.1612949401 - - PREDICTED: CLIP-associated protein [Jatropha curcas]
15 Hb_011344_020 0.1619487871 - - PREDICTED: hsp70-Hsp90 organizing protein 3-like [Jatropha curcas]
16 Hb_000041_300 0.1627855021 transcription factor TF Family: SNF2 PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X2 [Jatropha curcas]
17 Hb_000015_100 0.1628858078 - - PREDICTED: probable methionine--tRNA ligase, mitochondrial [Jatropha curcas]
18 Hb_048141_020 0.1633000062 - - tetratricopeptide repeat-like superfamily protein, partial [Manihot esculenta]
19 Hb_001898_090 0.1633592271 - - PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic [Jatropha curcas]
20 Hb_000376_060 0.1653216952 - - PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_137276_010 Hb_137276_010 Hb_007313_100 Hb_007313_100 Hb_137276_010--Hb_007313_100 Hb_011931_060 Hb_011931_060 Hb_137276_010--Hb_011931_060 Hb_004545_170 Hb_004545_170 Hb_137276_010--Hb_004545_170 Hb_003058_020 Hb_003058_020 Hb_137276_010--Hb_003058_020 Hb_022250_100 Hb_022250_100 Hb_137276_010--Hb_022250_100 Hb_002092_110 Hb_002092_110 Hb_137276_010--Hb_002092_110 Hb_007313_100--Hb_011931_060 Hb_007313_100--Hb_003058_020 Hb_007313_110 Hb_007313_110 Hb_007313_100--Hb_007313_110 Hb_143629_060 Hb_143629_060 Hb_007313_100--Hb_143629_060 Hb_004987_070 Hb_004987_070 Hb_007313_100--Hb_004987_070 Hb_000479_170 Hb_000479_170 Hb_011931_060--Hb_000479_170 Hb_000816_100 Hb_000816_100 Hb_011931_060--Hb_000816_100 Hb_002368_070 Hb_002368_070 Hb_011931_060--Hb_002368_070 Hb_000958_070 Hb_000958_070 Hb_011931_060--Hb_000958_070 Hb_000331_560 Hb_000331_560 Hb_011931_060--Hb_000331_560 Hb_000033_110 Hb_000033_110 Hb_011931_060--Hb_000033_110 Hb_004223_290 Hb_004223_290 Hb_004545_170--Hb_004223_290 Hb_002044_050 Hb_002044_050 Hb_004545_170--Hb_002044_050 Hb_011344_020 Hb_011344_020 Hb_004545_170--Hb_011344_020 Hb_000261_100 Hb_000261_100 Hb_004545_170--Hb_000261_100 Hb_001401_060 Hb_001401_060 Hb_004545_170--Hb_001401_060 Hb_004875_030 Hb_004875_030 Hb_004545_170--Hb_004875_030 Hb_003058_020--Hb_004987_070 Hb_000015_100 Hb_000015_100 Hb_003058_020--Hb_000015_100 Hb_048141_020 Hb_048141_020 Hb_003058_020--Hb_048141_020 Hb_003058_020--Hb_011931_060 Hb_006618_050 Hb_006618_050 Hb_003058_020--Hb_006618_050 Hb_007035_040 Hb_007035_040 Hb_003058_020--Hb_007035_040 Hb_006355_020 Hb_006355_020 Hb_022250_100--Hb_006355_020 Hb_000041_300 Hb_000041_300 Hb_022250_100--Hb_000041_300 Hb_000684_350 Hb_000684_350 Hb_022250_100--Hb_000684_350 Hb_022250_100--Hb_000958_070 Hb_005250_010 Hb_005250_010 Hb_022250_100--Hb_005250_010 Hb_000562_050 Hb_000562_050 Hb_022250_100--Hb_000562_050 Hb_000347_270 Hb_000347_270 Hb_002092_110--Hb_000347_270 Hb_000853_260 Hb_000853_260 Hb_002092_110--Hb_000853_260 Hb_003104_040 Hb_003104_040 Hb_002092_110--Hb_003104_040 Hb_001153_050 Hb_001153_050 Hb_002092_110--Hb_001153_050 Hb_002805_060 Hb_002805_060 Hb_002092_110--Hb_002805_060 Hb_000156_160 Hb_000156_160 Hb_002092_110--Hb_000156_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
91.1885 36.7974 52.2692 62.6056 114.774 56.0482
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
41.5413 11.5724 17.38 46.3401 162.447

CAGE analysis