Hb_154141_010

Information

Type -
Description -
Location Contig154141: 1071-7082
Sequence    

Annotation

kegg
ID pop:POPTR_0005s043601
description hypothetical protein
nr
ID XP_012089461.1
description PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JVM2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23412 PE=4 SV=1
Gene Ontology
ID GO:0000166
description disease resistance protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_154141_010 0.0 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
2 Hb_022958_010 0.1584140382 - - PREDICTED: probable disease resistance protein At4g27220 [Populus euphratica]
3 Hb_000599_230 0.1673482248 - - -
4 Hb_006905_030 0.1807249593 - - -
5 Hb_090530_010 0.1815167981 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]
6 Hb_000010_290 0.1818021043 - - -
7 Hb_007313_100 0.1839867598 desease resistance Gene Name: NB-ARC Disease resistance protein RPS2, putative [Ricinus communis]
8 Hb_002518_120 0.1841057351 - - hypothetical protein RCOM_0731250 [Ricinus communis]
9 Hb_008123_010 0.1867622929 - - -
10 Hb_006618_050 0.187086349 - - PREDICTED: elongation factor G-2, chloroplastic [Jatropha curcas]
11 Hb_032258_010 0.1883842375 - - hypothetical protein POPTR_0013s025001g, partial [Populus trichocarpa]
12 Hb_005801_020 0.1885564466 - - PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3 [Jatropha curcas]
13 Hb_011616_020 0.1940760515 - - hypothetical protein CICLE_v10004968mg [Citrus clementina]
14 Hb_003058_020 0.1956283718 - - PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Jatropha curcas]
15 Hb_001516_050 0.1984665776 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Jatropha curcas]
16 Hb_000062_510 0.2001335887 - - PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Jatropha curcas]
17 Hb_007313_110 0.2010676533 - - phosphoprotein phosphatase, putative [Ricinus communis]
18 Hb_031658_040 0.2016385489 - - -
19 Hb_000087_140 0.2056618991 - - PREDICTED: pentatricopeptide repeat-containing protein At5g27270 isoform X1 [Jatropha curcas]
20 Hb_005250_030 0.2067354419 - - PREDICTED: uncharacterized protein LOC105640177 [Jatropha curcas]

Gene co-expression network

sample Hb_154141_010 Hb_154141_010 Hb_022958_010 Hb_022958_010 Hb_154141_010--Hb_022958_010 Hb_000599_230 Hb_000599_230 Hb_154141_010--Hb_000599_230 Hb_006905_030 Hb_006905_030 Hb_154141_010--Hb_006905_030 Hb_090530_010 Hb_090530_010 Hb_154141_010--Hb_090530_010 Hb_000010_290 Hb_000010_290 Hb_154141_010--Hb_000010_290 Hb_007313_100 Hb_007313_100 Hb_154141_010--Hb_007313_100 Hb_022958_010--Hb_090530_010 Hb_006274_050 Hb_006274_050 Hb_022958_010--Hb_006274_050 Hb_022958_010--Hb_006905_030 Hb_001341_020 Hb_001341_020 Hb_022958_010--Hb_001341_020 Hb_032876_030 Hb_032876_030 Hb_022958_010--Hb_032876_030 Hb_004735_020 Hb_004735_020 Hb_000599_230--Hb_004735_020 Hb_002681_080 Hb_002681_080 Hb_000599_230--Hb_002681_080 Hb_002740_190 Hb_002740_190 Hb_000599_230--Hb_002740_190 Hb_010757_030 Hb_010757_030 Hb_000599_230--Hb_010757_030 Hb_000479_170 Hb_000479_170 Hb_000599_230--Hb_000479_170 Hb_025477_050 Hb_025477_050 Hb_000599_230--Hb_025477_050 Hb_006573_150 Hb_006573_150 Hb_006905_030--Hb_006573_150 Hb_005601_020 Hb_005601_020 Hb_006905_030--Hb_005601_020 Hb_001981_040 Hb_001981_040 Hb_006905_030--Hb_001981_040 Hb_167103_010 Hb_167103_010 Hb_006905_030--Hb_167103_010 Hb_000062_510 Hb_000062_510 Hb_006905_030--Hb_000062_510 Hb_114893_040 Hb_114893_040 Hb_006905_030--Hb_114893_040 Hb_008092_080 Hb_008092_080 Hb_090530_010--Hb_008092_080 Hb_090530_010--Hb_002740_190 Hb_024714_080 Hb_024714_080 Hb_090530_010--Hb_024714_080 Hb_028707_110 Hb_028707_110 Hb_090530_010--Hb_028707_110 Hb_008123_010 Hb_008123_010 Hb_090530_010--Hb_008123_010 Hb_003077_130 Hb_003077_130 Hb_090530_010--Hb_003077_130 Hb_002518_120 Hb_002518_120 Hb_000010_290--Hb_002518_120 Hb_000676_200 Hb_000676_200 Hb_000010_290--Hb_000676_200 Hb_001824_090 Hb_001824_090 Hb_000010_290--Hb_001824_090 Hb_003544_010 Hb_003544_010 Hb_000010_290--Hb_003544_010 Hb_003475_020 Hb_003475_020 Hb_000010_290--Hb_003475_020 Hb_003994_110 Hb_003994_110 Hb_000010_290--Hb_003994_110 Hb_137276_010 Hb_137276_010 Hb_007313_100--Hb_137276_010 Hb_011931_060 Hb_011931_060 Hb_007313_100--Hb_011931_060 Hb_003058_020 Hb_003058_020 Hb_007313_100--Hb_003058_020 Hb_007313_110 Hb_007313_110 Hb_007313_100--Hb_007313_110 Hb_143629_060 Hb_143629_060 Hb_007313_100--Hb_143629_060 Hb_004987_070 Hb_004987_070 Hb_007313_100--Hb_004987_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.08756 0.474961 1.42372 0.968748 1.43011 1.72015
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.11946 0.491596 0.735265 3.48427 6.89803

CAGE analysis