Hb_167183_010

Information

Type -
Description -
Location Contig167183: 1314-4563
Sequence    

Annotation

kegg
ID sly:104646181
description uncharacterized LOC104646181
nr
ID XP_012075160.1
description PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A061DPQ5
description Uncharacterized protein OS=Theobroma cacao GN=TCM_003164 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167183_010 0.0 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
2 Hb_011478_010 0.1766926093 - - -
3 Hb_003711_030 0.1917325308 - - PREDICTED: uncharacterized protein LOC102621950 [Citrus sinensis]
4 Hb_141425_010 0.2153771927 - - hypothetical protein POPTR_0001s43680g, partial [Populus trichocarpa]
5 Hb_000987_110 0.2153841062 - - PREDICTED: uncharacterized protein LOC104902780 [Beta vulgaris subsp. vulgaris]
6 Hb_123396_010 0.2154763018 - - hypothetical protein AMTR_s00510p00011440 [Amborella trichopoda]
7 Hb_009268_030 0.2278049566 - - ribosomal protein S7 [Piper cenocladum]
8 Hb_170973_010 0.2278419171 - - PREDICTED: uncharacterized protein LOC105644346 [Jatropha curcas]
9 Hb_004124_010 0.2470278846 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
10 Hb_004078_030 0.2559802003 - - Putative polyprotein, identical [Solanum demissum]
11 Hb_004019_060 0.2559914439 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
12 Hb_008601_020 0.255994651 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_004989_010 0.2560214246 - - retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group]
14 Hb_017184_010 0.256321965 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
15 Hb_001952_080 0.2563772751 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
16 Hb_039316_010 0.2564046085 - - PREDICTED: uncharacterized protein LOC105771917 [Gossypium raimondii]
17 Hb_113614_010 0.2564198969 - - hypothetical protein VITISV_001308 [Vitis vinifera]
18 Hb_000029_430 0.2564542051 - - PREDICTED: adenylate isopentenyltransferase 5, chloroplastic-like [Jatropha curcas]
19 Hb_181107_010 0.2566105289 - - hypothetical protein, partial [Pseudomonas tolaasii]
20 Hb_001168_090 0.2567652271 - - PREDICTED: uncharacterized protein LOC104246050 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_167183_010 Hb_167183_010 Hb_011478_010 Hb_011478_010 Hb_167183_010--Hb_011478_010 Hb_003711_030 Hb_003711_030 Hb_167183_010--Hb_003711_030 Hb_141425_010 Hb_141425_010 Hb_167183_010--Hb_141425_010 Hb_000987_110 Hb_000987_110 Hb_167183_010--Hb_000987_110 Hb_123396_010 Hb_123396_010 Hb_167183_010--Hb_123396_010 Hb_009268_030 Hb_009268_030 Hb_167183_010--Hb_009268_030 Hb_011478_010--Hb_003711_030 Hb_057451_040 Hb_057451_040 Hb_011478_010--Hb_057451_040 Hb_000268_100 Hb_000268_100 Hb_011478_010--Hb_000268_100 Hb_002025_090 Hb_002025_090 Hb_011478_010--Hb_002025_090 Hb_002122_020 Hb_002122_020 Hb_011478_010--Hb_002122_020 Hb_003711_030--Hb_057451_040 Hb_003711_030--Hb_000268_100 Hb_003711_030--Hb_002025_090 Hb_003711_030--Hb_002122_020 Hb_141425_010--Hb_000987_110 Hb_141425_010--Hb_123396_010 Hb_141425_010--Hb_009268_030 Hb_170973_010 Hb_170973_010 Hb_141425_010--Hb_170973_010 Hb_004124_010 Hb_004124_010 Hb_141425_010--Hb_004124_010 Hb_004078_030 Hb_004078_030 Hb_141425_010--Hb_004078_030 Hb_000987_110--Hb_123396_010 Hb_000987_110--Hb_009268_030 Hb_000987_110--Hb_170973_010 Hb_000987_110--Hb_004124_010 Hb_000987_110--Hb_004078_030 Hb_123396_010--Hb_009268_030 Hb_123396_010--Hb_170973_010 Hb_123396_010--Hb_004124_010 Hb_123396_010--Hb_004078_030 Hb_009268_030--Hb_170973_010 Hb_009268_030--Hb_004124_010 Hb_001124_170 Hb_001124_170 Hb_009268_030--Hb_001124_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0198361
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0624029 0 0.138818

CAGE analysis