Hb_000656_330

Information

Type -
Description -
Location Contig656: 274028-276355
Sequence    

Annotation

kegg
ID pop:POPTR_0003s06530g
description POPTRDRAFT_645825; hypothetical protein
nr
ID XP_012068868.1
description PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
swissprot
ID O65351
description Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1
trembl
ID A0A067KWV8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24685 PE=3 SV=1
Gene Ontology
ID GO:0005774
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52746: 274231-276557
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000656_330 0.0 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
2 Hb_000381_010 0.1298786048 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like [Jatropha curcas]
3 Hb_009252_010 0.1518079423 - - PREDICTED: kinesin light chain [Jatropha curcas]
4 Hb_021495_020 0.1574915538 - - chitinase, putative [Ricinus communis]
5 Hb_015978_110 0.1597706158 - - PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Jatropha curcas]
6 Hb_009674_050 0.1657685849 - - Endosomal P24A protein precursor, putative [Ricinus communis]
7 Hb_005348_110 0.1664135898 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
8 Hb_010175_030 0.1677869264 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
9 Hb_000390_030 0.1706475464 - - hypothetical protein ZEAMMB73_364791 [Zea mays]
10 Hb_000011_220 0.1730643584 - - PREDICTED: uncharacterized protein LOC105631313 [Jatropha curcas]
11 Hb_000946_110 0.1779504052 - - GTP cyclohydrolase I, putative [Ricinus communis]
12 Hb_000106_030 0.1803272589 - - amino acid transporter, putative [Ricinus communis]
13 Hb_011224_100 0.1841134722 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001916_090 0.1847623772 - - beta-1,2-n-acetylglucosaminyltransferase II, putative [Ricinus communis]
15 Hb_000836_060 0.1853268903 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 [Jatropha curcas]
16 Hb_001882_020 0.1896977685 - - PREDICTED: uncharacterized protein LOC105628417 [Jatropha curcas]
17 Hb_000920_310 0.1908425213 - - Ran GTPase binding protein, putative [Ricinus communis]
18 Hb_000417_170 0.191327181 - - PREDICTED: uncharacterized protein LOC105649689 [Jatropha curcas]
19 Hb_030959_010 0.1926465593 - - cullin, putative [Ricinus communis]
20 Hb_008699_030 0.192745965 - - hypothetical protein CISIN_1g017963mg [Citrus sinensis]

Gene co-expression network

sample Hb_000656_330 Hb_000656_330 Hb_000381_010 Hb_000381_010 Hb_000656_330--Hb_000381_010 Hb_009252_010 Hb_009252_010 Hb_000656_330--Hb_009252_010 Hb_021495_020 Hb_021495_020 Hb_000656_330--Hb_021495_020 Hb_015978_110 Hb_015978_110 Hb_000656_330--Hb_015978_110 Hb_009674_050 Hb_009674_050 Hb_000656_330--Hb_009674_050 Hb_005348_110 Hb_005348_110 Hb_000656_330--Hb_005348_110 Hb_001142_010 Hb_001142_010 Hb_000381_010--Hb_001142_010 Hb_000946_110 Hb_000946_110 Hb_000381_010--Hb_000946_110 Hb_015675_030 Hb_015675_030 Hb_000381_010--Hb_015675_030 Hb_000106_030 Hb_000106_030 Hb_000381_010--Hb_000106_030 Hb_010288_060 Hb_010288_060 Hb_000381_010--Hb_010288_060 Hb_030959_010 Hb_030959_010 Hb_009252_010--Hb_030959_010 Hb_009252_010--Hb_009674_050 Hb_000120_860 Hb_000120_860 Hb_009252_010--Hb_000120_860 Hb_005228_040 Hb_005228_040 Hb_009252_010--Hb_005228_040 Hb_000684_390 Hb_000684_390 Hb_009252_010--Hb_000684_390 Hb_009252_010--Hb_005348_110 Hb_000062_400 Hb_000062_400 Hb_021495_020--Hb_000062_400 Hb_001491_030 Hb_001491_030 Hb_021495_020--Hb_001491_030 Hb_009020_040 Hb_009020_040 Hb_021495_020--Hb_009020_040 Hb_011926_040 Hb_011926_040 Hb_021495_020--Hb_011926_040 Hb_003746_010 Hb_003746_010 Hb_021495_020--Hb_003746_010 Hb_011224_100 Hb_011224_100 Hb_021495_020--Hb_011224_100 Hb_015978_110--Hb_021495_020 Hb_015978_110--Hb_000381_010 Hb_003030_030 Hb_003030_030 Hb_015978_110--Hb_003030_030 Hb_113818_010 Hb_113818_010 Hb_015978_110--Hb_113818_010 Hb_000417_170 Hb_000417_170 Hb_015978_110--Hb_000417_170 Hb_009674_050--Hb_003746_010 Hb_002400_060 Hb_002400_060 Hb_009674_050--Hb_002400_060 Hb_009674_050--Hb_005348_110 Hb_009674_050--Hb_030959_010 Hb_005116_140 Hb_005116_140 Hb_009674_050--Hb_005116_140 Hb_005348_110--Hb_003746_010 Hb_001216_110 Hb_001216_110 Hb_005348_110--Hb_001216_110 Hb_000011_220 Hb_000011_220 Hb_005348_110--Hb_000011_220 Hb_010175_030 Hb_010175_030 Hb_005348_110--Hb_010175_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.4248 8.03416 8.1397 67.3652 7.33816 17.7075
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.951 6.83634 35.8631 17.2643 91.5054

CAGE analysis