Hb_131684_010

Information

Type -
Description -
Location Contig131684: 83-550
Sequence    

Annotation

kegg
ID rcu:RCOM_0702500
description hypothetical protein
nr
ID XP_002523552.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SC33
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0702500 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_131684_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000796_020 0.1576631952 - - ADP-ribosylation factor [Phaseolus vulgaris]
3 Hb_004453_070 0.1742675266 transcription factor TF Family: CPP PREDICTED: CRC domain-containing protein TSO1-like isoform X1 [Jatropha curcas]
4 Hb_034299_070 0.174487499 - - actin binding protein, putative [Ricinus communis]
5 Hb_104571_010 0.1798438869 - - PREDICTED: metal transporter Nramp1 [Jatropha curcas]
6 Hb_003938_160 0.2007947368 - - PREDICTED: transcription factor bHLH155 [Jatropha curcas]
7 Hb_001217_010 0.2085333878 - - hypothetical protein JCGZ_04022 [Jatropha curcas]
8 Hb_000649_340 0.2113589557 - - PREDICTED: dynein light chain 1, cytoplasmic [Jatropha curcas]
9 Hb_002217_500 0.2163775935 - - hypothetical protein JCGZ_19014 [Jatropha curcas]
10 Hb_002639_020 0.2166488073 - - PREDICTED: probable alpha-amylase 2 [Jatropha curcas]
11 Hb_006569_060 0.2186613461 - - plasma membrane intrinsic protein PIP2;3 [Hevea brasiliensis]
12 Hb_186647_010 0.2186922787 - - -
13 Hb_001221_520 0.2217919791 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002450_030 0.2228290518 - - ATPP2-A13, putative [Ricinus communis]
15 Hb_000164_010 0.2278438226 - - small heat-shock protein, putative [Ricinus communis]
16 Hb_004899_310 0.2288020061 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000291_160 0.2297692283 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
18 Hb_000776_060 0.2313068228 - - histone H4 [Zea mays]
19 Hb_003894_020 0.2322204483 - - plant sec1, putative [Ricinus communis]
20 Hb_000483_400 0.2323323757 - - PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_131684_010 Hb_131684_010 Hb_000796_020 Hb_000796_020 Hb_131684_010--Hb_000796_020 Hb_004453_070 Hb_004453_070 Hb_131684_010--Hb_004453_070 Hb_034299_070 Hb_034299_070 Hb_131684_010--Hb_034299_070 Hb_104571_010 Hb_104571_010 Hb_131684_010--Hb_104571_010 Hb_003938_160 Hb_003938_160 Hb_131684_010--Hb_003938_160 Hb_001217_010 Hb_001217_010 Hb_131684_010--Hb_001217_010 Hb_000683_100 Hb_000683_100 Hb_000796_020--Hb_000683_100 Hb_000776_060 Hb_000776_060 Hb_000796_020--Hb_000776_060 Hb_030992_010 Hb_030992_010 Hb_000796_020--Hb_030992_010 Hb_122636_010 Hb_122636_010 Hb_000796_020--Hb_122636_010 Hb_000796_020--Hb_004453_070 Hb_000062_090 Hb_000062_090 Hb_000796_020--Hb_000062_090 Hb_001195_410 Hb_001195_410 Hb_004453_070--Hb_001195_410 Hb_006569_060 Hb_006569_060 Hb_004453_070--Hb_006569_060 Hb_004453_070--Hb_000776_060 Hb_012362_030 Hb_012362_030 Hb_004453_070--Hb_012362_030 Hb_004453_070--Hb_000062_090 Hb_034299_070--Hb_004453_070 Hb_034299_070--Hb_000796_020 Hb_034299_070--Hb_104571_010 Hb_002582_080 Hb_002582_080 Hb_034299_070--Hb_002582_080 Hb_004162_060 Hb_004162_060 Hb_034299_070--Hb_004162_060 Hb_003207_150 Hb_003207_150 Hb_104571_010--Hb_003207_150 Hb_000300_230 Hb_000300_230 Hb_104571_010--Hb_000300_230 Hb_000177_110 Hb_000177_110 Hb_104571_010--Hb_000177_110 Hb_003875_010 Hb_003875_010 Hb_104571_010--Hb_003875_010 Hb_002217_500 Hb_002217_500 Hb_104571_010--Hb_002217_500 Hb_000805_140 Hb_000805_140 Hb_104571_010--Hb_000805_140 Hb_013057_020 Hb_013057_020 Hb_003938_160--Hb_013057_020 Hb_000384_110 Hb_000384_110 Hb_003938_160--Hb_000384_110 Hb_004450_050 Hb_004450_050 Hb_003938_160--Hb_004450_050 Hb_002344_130 Hb_002344_130 Hb_003938_160--Hb_002344_130 Hb_145629_010 Hb_145629_010 Hb_003938_160--Hb_145629_010 Hb_007926_050 Hb_007926_050 Hb_003938_160--Hb_007926_050 Hb_001217_010--Hb_122636_010 Hb_100137_010 Hb_100137_010 Hb_001217_010--Hb_100137_010 Hb_188313_010 Hb_188313_010 Hb_001217_010--Hb_188313_010 Hb_002760_050 Hb_002760_050 Hb_001217_010--Hb_002760_050 Hb_000125_020 Hb_000125_020 Hb_001217_010--Hb_000125_020 Hb_000291_160 Hb_000291_160 Hb_001217_010--Hb_000291_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.59271 6.14203 1.12756 19.1766 0.733983 1.04283
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.39926 3.76934 3.34369 1.42978 1.30069

CAGE analysis