Hb_068492_010

Information

Type -
Description -
Location Contig68492: 1-972
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54095: 124-601
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_068492_010 0.0 - - -
2 Hb_029622_020 0.156461042 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002641_050 0.1654513274 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 48 [Jatropha curcas]
4 Hb_000051_030 0.1661207962 - - PREDICTED: E3 ubiquitin-protein ligase SINAT2-like [Jatropha curcas]
5 Hb_008453_080 0.1691488722 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 6 isoform X2 [Jatropha curcas]
6 Hb_000836_610 0.1707786094 - - stem-specific protein TSJT1-like [Jatropha curcas]
7 Hb_019863_030 0.1737072976 - - hypothetical protein JCGZ_00393 [Jatropha curcas]
8 Hb_110558_010 0.1742767208 - - PREDICTED: uncharacterized protein LOC105641877 [Jatropha curcas]
9 Hb_004586_240 0.1755856547 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
10 Hb_001842_060 0.181951983 desease resistance Gene Name: ABC_trans_N hypothetical protein JCGZ_10908 [Jatropha curcas]
11 Hb_000421_020 0.1888405984 - - ascorbate peroxidase [Hevea brasiliensis]
12 Hb_000914_130 0.190630498 - - copper-transporting atpase p-type, putative [Ricinus communis]
13 Hb_000953_040 0.1929565492 - - hypothetical protein OsJ_19135 [Oryza sativa Japonica Group]
14 Hb_005504_030 0.1951961207 - - PREDICTED: somatic embryogenesis receptor kinase 2-like [Pyrus x bretschneideri]
15 Hb_025236_020 0.1992747437 transcription factor TF Family: bHLH hypothetical protein POPTR_0018s11800g [Populus trichocarpa]
16 Hb_000984_260 0.1993893332 - - ergosterol biosynthetic protein 28 [Jatropha curcas]
17 Hb_004032_090 0.2017175353 - - PREDICTED: protein AIG1 [Jatropha curcas]
18 Hb_005649_010 0.2018964109 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
19 Hb_001100_030 0.202761074 - - hypothetical protein POPTR_0015s00420g [Populus trichocarpa]
20 Hb_000130_080 0.203888894 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_068492_010 Hb_068492_010 Hb_029622_020 Hb_029622_020 Hb_068492_010--Hb_029622_020 Hb_002641_050 Hb_002641_050 Hb_068492_010--Hb_002641_050 Hb_000051_030 Hb_000051_030 Hb_068492_010--Hb_000051_030 Hb_008453_080 Hb_008453_080 Hb_068492_010--Hb_008453_080 Hb_000836_610 Hb_000836_610 Hb_068492_010--Hb_000836_610 Hb_019863_030 Hb_019863_030 Hb_068492_010--Hb_019863_030 Hb_004032_090 Hb_004032_090 Hb_029622_020--Hb_004032_090 Hb_011716_050 Hb_011716_050 Hb_029622_020--Hb_011716_050 Hb_005649_010 Hb_005649_010 Hb_029622_020--Hb_005649_010 Hb_000953_040 Hb_000953_040 Hb_029622_020--Hb_000953_040 Hb_114684_010 Hb_114684_010 Hb_029622_020--Hb_114684_010 Hb_029622_020--Hb_000051_030 Hb_001318_110 Hb_001318_110 Hb_002641_050--Hb_001318_110 Hb_004667_040 Hb_004667_040 Hb_002641_050--Hb_004667_040 Hb_025236_020 Hb_025236_020 Hb_002641_050--Hb_025236_020 Hb_013938_010 Hb_013938_010 Hb_002641_050--Hb_013938_010 Hb_002343_020 Hb_002343_020 Hb_002641_050--Hb_002343_020 Hb_184008_010 Hb_184008_010 Hb_002641_050--Hb_184008_010 Hb_000347_020 Hb_000347_020 Hb_000051_030--Hb_000347_020 Hb_004286_030 Hb_004286_030 Hb_000051_030--Hb_004286_030 Hb_002662_090 Hb_002662_090 Hb_000051_030--Hb_002662_090 Hb_000051_030--Hb_001318_110 Hb_008453_080--Hb_002641_050 Hb_000165_070 Hb_000165_070 Hb_008453_080--Hb_000165_070 Hb_110558_010 Hb_110558_010 Hb_008453_080--Hb_110558_010 Hb_080147_020 Hb_080147_020 Hb_008453_080--Hb_080147_020 Hb_000529_040 Hb_000529_040 Hb_008453_080--Hb_000529_040 Hb_000836_610--Hb_002641_050 Hb_001842_060 Hb_001842_060 Hb_000836_610--Hb_001842_060 Hb_042083_060 Hb_042083_060 Hb_000836_610--Hb_042083_060 Hb_000836_610--Hb_000051_030 Hb_001195_220 Hb_001195_220 Hb_000836_610--Hb_001195_220 Hb_000007_430 Hb_000007_430 Hb_019863_030--Hb_000007_430 Hb_004586_240 Hb_004586_240 Hb_019863_030--Hb_004586_240 Hb_005504_030 Hb_005504_030 Hb_019863_030--Hb_005504_030 Hb_000139_140 Hb_000139_140 Hb_019863_030--Hb_000139_140 Hb_000005_340 Hb_000005_340 Hb_019863_030--Hb_000005_340 Hb_172706_020 Hb_172706_020 Hb_019863_030--Hb_172706_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.33705 21.4478 17.8746 7.05834 0.41555 0.82914
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.34606 5.10667 0.250752 20.8826 4.16564

CAGE analysis