Hb_110558_010

Information

Type -
Description -
Location Contig110558: 4140-6209
Sequence    

Annotation

kegg
ID rcu:RCOM_0211560
description hypothetical protein
nr
ID XP_012081916.1
description PREDICTED: uncharacterized protein LOC105641877 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZZ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19259 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_110558_010 0.0 - - PREDICTED: uncharacterized protein LOC105641877 [Jatropha curcas]
2 Hb_012366_050 0.0993765445 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Jatropha curcas]
3 Hb_001123_190 0.1161461938 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Jatropha curcas]
4 Hb_003226_090 0.1309900978 - - PREDICTED: bifunctional epoxide hydrolase 2 [Jatropha curcas]
5 Hb_005504_030 0.1323434672 - - PREDICTED: somatic embryogenesis receptor kinase 2-like [Pyrus x bretschneideri]
6 Hb_054865_050 0.1360655884 - - calcium-dependent protein kinase, putative [Ricinus communis]
7 Hb_004032_090 0.1383766681 - - PREDICTED: protein AIG1 [Jatropha curcas]
8 Hb_001514_240 0.1396252235 - - PREDICTED: aspartic proteinase CDR1 [Jatropha curcas]
9 Hb_001318_150 0.142721342 - - PREDICTED: shaggy-related protein kinase alpha-like [Jatropha curcas]
10 Hb_000161_240 0.1434178795 - - PREDICTED: ion channel DMI1-like isoform X1 [Jatropha curcas]
11 Hb_178818_010 0.144948212 - - CRINKLY4 related 3, putative [Theobroma cacao]
12 Hb_083078_010 0.1449708155 - - Splicing factor, arginine/serine-rich, putative [Ricinus communis]
13 Hb_080147_020 0.1451237471 - - 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
14 Hb_000165_070 0.1458590739 - - hypothetical protein JCGZ_01211 [Jatropha curcas]
15 Hb_026698_020 0.1460053142 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
16 Hb_024714_070 0.146643669 - - PREDICTED: uncharacterized protein LOC105642502 [Jatropha curcas]
17 Hb_009449_100 0.1473630924 - - PREDICTED: equilibrative nucleotide transporter 1 [Jatropha curcas]
18 Hb_000375_060 0.147649561 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Jatropha curcas]
19 Hb_000024_130 0.1510400954 - - conserved hypothetical protein [Ricinus communis]
20 Hb_048476_040 0.1515292576 - - PREDICTED: uncharacterized protein LOC104611656 [Nelumbo nucifera]

Gene co-expression network

sample Hb_110558_010 Hb_110558_010 Hb_012366_050 Hb_012366_050 Hb_110558_010--Hb_012366_050 Hb_001123_190 Hb_001123_190 Hb_110558_010--Hb_001123_190 Hb_003226_090 Hb_003226_090 Hb_110558_010--Hb_003226_090 Hb_005504_030 Hb_005504_030 Hb_110558_010--Hb_005504_030 Hb_054865_050 Hb_054865_050 Hb_110558_010--Hb_054865_050 Hb_004032_090 Hb_004032_090 Hb_110558_010--Hb_004032_090 Hb_012366_050--Hb_001123_190 Hb_009449_100 Hb_009449_100 Hb_012366_050--Hb_009449_100 Hb_026698_020 Hb_026698_020 Hb_012366_050--Hb_026698_020 Hb_001514_240 Hb_001514_240 Hb_012366_050--Hb_001514_240 Hb_048476_040 Hb_048476_040 Hb_012366_050--Hb_048476_040 Hb_001123_190--Hb_004032_090 Hb_001123_190--Hb_048476_040 Hb_001123_190--Hb_026698_020 Hb_083078_010 Hb_083078_010 Hb_001123_190--Hb_083078_010 Hb_000256_160 Hb_000256_160 Hb_003226_090--Hb_000256_160 Hb_013968_010 Hb_013968_010 Hb_003226_090--Hb_013968_010 Hb_000007_410 Hb_000007_410 Hb_003226_090--Hb_000007_410 Hb_004883_020 Hb_004883_020 Hb_003226_090--Hb_004883_020 Hb_002010_090 Hb_002010_090 Hb_003226_090--Hb_002010_090 Hb_000230_530 Hb_000230_530 Hb_003226_090--Hb_000230_530 Hb_000009_140 Hb_000009_140 Hb_005504_030--Hb_000009_140 Hb_004586_240 Hb_004586_240 Hb_005504_030--Hb_004586_240 Hb_033363_010 Hb_033363_010 Hb_005504_030--Hb_033363_010 Hb_000258_090 Hb_000258_090 Hb_005504_030--Hb_000258_090 Hb_000072_020 Hb_000072_020 Hb_005504_030--Hb_000072_020 Hb_010068_070 Hb_010068_070 Hb_005504_030--Hb_010068_070 Hb_054865_050--Hb_009449_100 Hb_005064_070 Hb_005064_070 Hb_054865_050--Hb_005064_070 Hb_002249_170 Hb_002249_170 Hb_054865_050--Hb_002249_170 Hb_000375_060 Hb_000375_060 Hb_054865_050--Hb_000375_060 Hb_054865_050--Hb_001514_240 Hb_000098_180 Hb_000098_180 Hb_054865_050--Hb_000098_180 Hb_000008_430 Hb_000008_430 Hb_004032_090--Hb_000008_430 Hb_002343_020 Hb_002343_020 Hb_004032_090--Hb_002343_020 Hb_000009_150 Hb_000009_150 Hb_004032_090--Hb_000009_150 Hb_004032_090--Hb_048476_040 Hb_006052_060 Hb_006052_060 Hb_004032_090--Hb_006052_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.383967 1.76854 1.90286 1.02636 0.0376734 0.12427
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.238973 0.239316 0.19467 1.51608 1.01253

CAGE analysis