Hb_002662_090

Information

Type -
Description -
Location Contig2662: 88317-91518
Sequence    

Annotation

kegg
ID rcu:RCOM_1589520
description ATP binding protein, putative
nr
ID XP_012068302.1
description PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
swissprot
ID Q93Y06
description Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1
trembl
ID A0A067KZS5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16103 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable inactive receptor kinase at5g67200

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27815: 89444-91782
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002662_090 0.0 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
2 Hb_001369_160 0.1143978273 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
3 Hb_001842_060 0.1303102557 desease resistance Gene Name: ABC_trans_N hypothetical protein JCGZ_10908 [Jatropha curcas]
4 Hb_002928_180 0.1326430868 - - catalase CAT1 [Manihot esculenta]
5 Hb_004286_030 0.1358117458 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
6 Hb_010174_190 0.1376159463 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR11-like [Jatropha curcas]
7 Hb_003894_100 0.138673186 - - PREDICTED: AT-hook motif nuclear-localized protein 1-like [Jatropha curcas]
8 Hb_001856_170 0.1386760841 - - PREDICTED: ABC transporter B family member 27 [Jatropha curcas]
9 Hb_002030_170 0.1392162166 - - PREDICTED: calcium-transporting ATPase 1-like [Jatropha curcas]
10 Hb_002660_040 0.1422501598 - - PREDICTED: CASP-like protein 5A1 isoform X1 [Jatropha curcas]
11 Hb_001341_200 0.1447578999 transcription factor TF Family: ARF PREDICTED: auxin response factor 4 [Jatropha curcas]
12 Hb_003576_050 0.1468781065 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
13 Hb_000120_310 0.1480347028 - - Gibberellin 3-beta-dioxygenase, putative [Ricinus communis]
14 Hb_000953_040 0.1495672959 - - hypothetical protein OsJ_19135 [Oryza sativa Japonica Group]
15 Hb_004586_240 0.1512774607 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
16 Hb_029584_090 0.1529586466 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
17 Hb_001355_070 0.1534203118 - - P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative isoform 2 [Theobroma cacao]
18 Hb_000313_370 0.1538815506 - - ABC transporter family protein [Hevea brasiliensis]
19 Hb_009823_010 0.1560113391 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
20 Hb_002471_140 0.157176228 - - PREDICTED: protein OBERON 3 [Jatropha curcas]

Gene co-expression network

sample Hb_002662_090 Hb_002662_090 Hb_001369_160 Hb_001369_160 Hb_002662_090--Hb_001369_160 Hb_001842_060 Hb_001842_060 Hb_002662_090--Hb_001842_060 Hb_002928_180 Hb_002928_180 Hb_002662_090--Hb_002928_180 Hb_004286_030 Hb_004286_030 Hb_002662_090--Hb_004286_030 Hb_010174_190 Hb_010174_190 Hb_002662_090--Hb_010174_190 Hb_003894_100 Hb_003894_100 Hb_002662_090--Hb_003894_100 Hb_000120_310 Hb_000120_310 Hb_001369_160--Hb_000120_310 Hb_001856_170 Hb_001856_170 Hb_001369_160--Hb_001856_170 Hb_001596_020 Hb_001596_020 Hb_001369_160--Hb_001596_020 Hb_002447_150 Hb_002447_150 Hb_001369_160--Hb_002447_150 Hb_001369_160--Hb_003894_100 Hb_002030_170 Hb_002030_170 Hb_001842_060--Hb_002030_170 Hb_002471_140 Hb_002471_140 Hb_001842_060--Hb_002471_140 Hb_000953_040 Hb_000953_040 Hb_001842_060--Hb_000953_040 Hb_004631_080 Hb_004631_080 Hb_001842_060--Hb_004631_080 Hb_000345_340 Hb_000345_340 Hb_001842_060--Hb_000345_340 Hb_000429_110 Hb_000429_110 Hb_002928_180--Hb_000429_110 Hb_000236_110 Hb_000236_110 Hb_002928_180--Hb_000236_110 Hb_000778_020 Hb_000778_020 Hb_002928_180--Hb_000778_020 Hb_002928_120 Hb_002928_120 Hb_002928_180--Hb_002928_120 Hb_002928_180--Hb_010174_190 Hb_001410_010 Hb_001410_010 Hb_002928_180--Hb_001410_010 Hb_000051_030 Hb_000051_030 Hb_004286_030--Hb_000051_030 Hb_010578_050 Hb_010578_050 Hb_004286_030--Hb_010578_050 Hb_004286_030--Hb_001842_060 Hb_005186_090 Hb_005186_090 Hb_004286_030--Hb_005186_090 Hb_000625_060 Hb_000625_060 Hb_004286_030--Hb_000625_060 Hb_025432_010 Hb_025432_010 Hb_010174_190--Hb_025432_010 Hb_064985_010 Hb_064985_010 Hb_010174_190--Hb_064985_010 Hb_001008_110 Hb_001008_110 Hb_010174_190--Hb_001008_110 Hb_022501_020 Hb_022501_020 Hb_010174_190--Hb_022501_020 Hb_068332_010 Hb_068332_010 Hb_010174_190--Hb_068332_010 Hb_003894_100--Hb_002447_150 Hb_008667_060 Hb_008667_060 Hb_003894_100--Hb_008667_060 Hb_000589_220 Hb_000589_220 Hb_003894_100--Hb_000589_220 Hb_003894_100--Hb_002928_180 Hb_002122_080 Hb_002122_080 Hb_003894_100--Hb_002122_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.739687 11.1489 4.54541 6.1963 1.06491 1.27115
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.661777 0.844447 0.616957 12.7996 1.46552

CAGE analysis