Hb_000165_070

Information

Type -
Description -
Location Contig165: 85164-88023
Sequence    

Annotation

kegg
ID pop:POPTR_0010s19190g
description POPTRDRAFT_822369; ferritin 2 precursor family protein
nr
ID KDP44711.1
description hypothetical protein JCGZ_01211 [Jatropha curcas]
swissprot
ID Q8H1T3
description Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1
trembl
ID A0A067L8G3
description Ferritin OS=Jatropha curcas GN=JCGZ_01211 PE=3 SV=1
Gene Ontology
ID GO:0008199
description ferritin- chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15190: 85188-88115
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000165_070 0.0 - - hypothetical protein JCGZ_01211 [Jatropha curcas]
2 Hb_007575_030 0.100536888 - - PREDICTED: protein RCC2 homolog [Jatropha curcas]
3 Hb_001240_050 0.1062929935 - - PREDICTED: CSC1-like protein At1g32090 [Jatropha curcas]
4 Hb_000760_080 0.1175144961 - - mutt domain protein, putative [Ricinus communis]
5 Hb_000737_010 0.1248005055 - - PREDICTED: putative E3 ubiquitin-protein ligase RING1a isoform X1 [Jatropha curcas]
6 Hb_004096_220 0.1284795548 - - PREDICTED: uncharacterized protein LOC105638706 isoform X1 [Jatropha curcas]
7 Hb_000438_010 0.1368681729 - - -
8 Hb_000024_130 0.1409040013 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004883_020 0.1423199538 - - PREDICTED: uncharacterized protein LOC105647351 [Jatropha curcas]
10 Hb_000803_120 0.1451403894 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X1 [Jatropha curcas]
11 Hb_000567_090 0.1457021206 - - PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Jatropha curcas]
12 Hb_110558_010 0.1458590739 - - PREDICTED: uncharacterized protein LOC105641877 [Jatropha curcas]
13 Hb_001123_190 0.146300286 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 15-like [Jatropha curcas]
14 Hb_000318_170 0.147209325 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
15 Hb_002411_160 0.1473876014 - - PREDICTED: uncharacterized protein LOC105631262 isoform X1 [Jatropha curcas]
16 Hb_086639_050 0.1526355603 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
17 Hb_001048_100 0.1531415865 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]
18 Hb_005568_050 0.1543350785 - - ascorbate peroxidase [Hevea brasiliensis]
19 Hb_003106_230 0.1555219963 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like [Jatropha curcas]
20 Hb_083078_010 0.1555923617 - - Splicing factor, arginine/serine-rich, putative [Ricinus communis]

Gene co-expression network

sample Hb_000165_070 Hb_000165_070 Hb_007575_030 Hb_007575_030 Hb_000165_070--Hb_007575_030 Hb_001240_050 Hb_001240_050 Hb_000165_070--Hb_001240_050 Hb_000760_080 Hb_000760_080 Hb_000165_070--Hb_000760_080 Hb_000737_010 Hb_000737_010 Hb_000165_070--Hb_000737_010 Hb_004096_220 Hb_004096_220 Hb_000165_070--Hb_004096_220 Hb_000438_010 Hb_000438_010 Hb_000165_070--Hb_000438_010 Hb_004883_020 Hb_004883_020 Hb_007575_030--Hb_004883_020 Hb_000261_310 Hb_000261_310 Hb_007575_030--Hb_000261_310 Hb_000116_240 Hb_000116_240 Hb_007575_030--Hb_000116_240 Hb_000318_170 Hb_000318_170 Hb_007575_030--Hb_000318_170 Hb_000042_380 Hb_000042_380 Hb_007575_030--Hb_000042_380 Hb_000012_320 Hb_000012_320 Hb_001240_050--Hb_000012_320 Hb_001048_100 Hb_001048_100 Hb_001240_050--Hb_001048_100 Hb_003659_010 Hb_003659_010 Hb_001240_050--Hb_003659_010 Hb_005545_020 Hb_005545_020 Hb_001240_050--Hb_005545_020 Hb_001117_080 Hb_001117_080 Hb_001240_050--Hb_001117_080 Hb_000760_080--Hb_001048_100 Hb_000024_130 Hb_000024_130 Hb_000760_080--Hb_000024_130 Hb_005568_050 Hb_005568_050 Hb_000760_080--Hb_005568_050 Hb_002503_050 Hb_002503_050 Hb_000760_080--Hb_002503_050 Hb_033312_050 Hb_033312_050 Hb_000760_080--Hb_033312_050 Hb_000731_210 Hb_000731_210 Hb_000760_080--Hb_000731_210 Hb_000737_010--Hb_000438_010 Hb_000737_010--Hb_007575_030 Hb_000791_050 Hb_000791_050 Hb_000737_010--Hb_000791_050 Hb_000737_010--Hb_004096_220 Hb_000936_090 Hb_000936_090 Hb_000737_010--Hb_000936_090 Hb_012033_010 Hb_012033_010 Hb_004096_220--Hb_012033_010 Hb_001307_200 Hb_001307_200 Hb_004096_220--Hb_001307_200 Hb_004096_220--Hb_000261_310 Hb_083078_010 Hb_083078_010 Hb_004096_220--Hb_083078_010 Hb_004096_220--Hb_000438_010 Hb_001268_300 Hb_001268_300 Hb_004096_220--Hb_001268_300 Hb_000438_010--Hb_000318_170 Hb_000438_010--Hb_007575_030 Hb_000438_010--Hb_000261_310 Hb_003106_110 Hb_003106_110 Hb_000438_010--Hb_003106_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.22039 47.7852 92.8967 40.5087 3.94124 7.89627
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.92477 3.46149 3.2209 75.7244 40.2593

CAGE analysis