Hb_067466_010

Information

Type -
Description -
Location Contig67466: 68-382
Sequence    

Annotation

kegg
ID cic:CICLE_v10023468mg
description hypothetical protein
nr
ID BAG15869.1
description ankyrin repeat protein [Bruguiera gymnorhiza]
swissprot
ID Q9ZU96
description Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=2 SV=1
trembl
ID B1Q4U3
description Ankyrin repeat protein OS=Bruguiera gymnorhiza PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_067466_010 0.0 - - ankyrin repeat protein [Bruguiera gymnorhiza]
2 Hb_011794_040 0.1856212384 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Populus euphratica]
3 Hb_131967_010 0.1979899654 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
4 Hb_000261_180 0.2005779604 - - Tetratricopeptide repeat-like superfamily protein, putative isoform 1 [Theobroma cacao]
5 Hb_000392_100 0.2060130062 transcription factor TF Family: zf-HD transcription factor, putative [Ricinus communis]
6 Hb_007694_050 0.2178439691 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
7 Hb_078477_050 0.2180914867 transcription factor TF Family: Orphans PREDICTED: uncharacterized protein LOC105648332 isoform X1 [Jatropha curcas]
8 Hb_008177_030 0.2219452376 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_172141_010 0.225056146 - - PREDICTED: uncharacterized protein LOC105641033 [Jatropha curcas]
10 Hb_002196_020 0.2289579984 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_000853_120 0.2306245998 - - PREDICTED: ethylene response sensor 1 [Jatropha curcas]
12 Hb_027445_050 0.2313869942 - - PREDICTED: titin isoform X13 [Jatropha curcas]
13 Hb_021420_010 0.233611505 - - hypothetical protein CICLE_v10029508mg [Citrus clementina]
14 Hb_012753_130 0.2362814188 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001089_040 0.2365461278 transcription factor TF Family: bHLH DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
16 Hb_000740_110 0.2389154854 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01850 [Jatropha curcas]
17 Hb_005754_010 0.2398453587 - - hypothetical protein POPTR_0660s00210g [Populus trichocarpa]
18 Hb_003477_010 0.2400269618 - - hypothetical protein JCGZ_21107 [Jatropha curcas]
19 Hb_005122_080 0.2405312908 - - prokaryotic DNA topoisomerase, putative [Ricinus communis]
20 Hb_006698_040 0.2407080596 - - bHLH1 transcription factor [Hevea brasiliensis]

Gene co-expression network

sample Hb_067466_010 Hb_067466_010 Hb_011794_040 Hb_011794_040 Hb_067466_010--Hb_011794_040 Hb_131967_010 Hb_131967_010 Hb_067466_010--Hb_131967_010 Hb_000261_180 Hb_000261_180 Hb_067466_010--Hb_000261_180 Hb_000392_100 Hb_000392_100 Hb_067466_010--Hb_000392_100 Hb_007694_050 Hb_007694_050 Hb_067466_010--Hb_007694_050 Hb_078477_050 Hb_078477_050 Hb_067466_010--Hb_078477_050 Hb_012753_130 Hb_012753_130 Hb_011794_040--Hb_012753_130 Hb_002961_060 Hb_002961_060 Hb_011794_040--Hb_002961_060 Hb_000441_150 Hb_000441_150 Hb_011794_040--Hb_000441_150 Hb_167234_010 Hb_167234_010 Hb_011794_040--Hb_167234_010 Hb_006588_150 Hb_006588_150 Hb_011794_040--Hb_006588_150 Hb_001369_440 Hb_001369_440 Hb_011794_040--Hb_001369_440 Hb_002148_020 Hb_002148_020 Hb_131967_010--Hb_002148_020 Hb_000001_190 Hb_000001_190 Hb_131967_010--Hb_000001_190 Hb_005754_010 Hb_005754_010 Hb_131967_010--Hb_005754_010 Hb_003464_080 Hb_003464_080 Hb_131967_010--Hb_003464_080 Hb_000530_010 Hb_000530_010 Hb_131967_010--Hb_000530_010 Hb_001769_080 Hb_001769_080 Hb_131967_010--Hb_001769_080 Hb_003477_010 Hb_003477_010 Hb_000261_180--Hb_003477_010 Hb_001930_050 Hb_001930_050 Hb_000261_180--Hb_001930_050 Hb_000069_160 Hb_000069_160 Hb_000261_180--Hb_000069_160 Hb_002217_310 Hb_002217_310 Hb_000261_180--Hb_002217_310 Hb_033642_110 Hb_033642_110 Hb_000261_180--Hb_033642_110 Hb_000261_180--Hb_012753_130 Hb_015401_030 Hb_015401_030 Hb_000392_100--Hb_015401_030 Hb_002248_140 Hb_002248_140 Hb_000392_100--Hb_002248_140 Hb_000139_240 Hb_000139_240 Hb_000392_100--Hb_000139_240 Hb_002493_100 Hb_002493_100 Hb_000392_100--Hb_002493_100 Hb_002270_010 Hb_002270_010 Hb_000392_100--Hb_002270_010 Hb_000186_040 Hb_000186_040 Hb_000392_100--Hb_000186_040 Hb_002196_020 Hb_002196_020 Hb_007694_050--Hb_002196_020 Hb_001437_180 Hb_001437_180 Hb_007694_050--Hb_001437_180 Hb_000318_510 Hb_000318_510 Hb_007694_050--Hb_000318_510 Hb_004225_020 Hb_004225_020 Hb_007694_050--Hb_004225_020 Hb_000270_760 Hb_000270_760 Hb_007694_050--Hb_000270_760 Hb_002636_050 Hb_002636_050 Hb_007694_050--Hb_002636_050 Hb_008177_030 Hb_008177_030 Hb_078477_050--Hb_008177_030 Hb_001486_070 Hb_001486_070 Hb_078477_050--Hb_001486_070 Hb_001140_350 Hb_001140_350 Hb_078477_050--Hb_001140_350 Hb_001366_210 Hb_001366_210 Hb_078477_050--Hb_001366_210 Hb_002111_060 Hb_002111_060 Hb_078477_050--Hb_002111_060 Hb_080313_010 Hb_080313_010 Hb_078477_050--Hb_080313_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.50128 4.08778 0.845672 4.98708 2.74306 7.60157
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.996069 4.70291 2.28471 8.04597 0

CAGE analysis