Hb_080313_010

Information

Type -
Description -
Location Contig80313: 3-2228
Sequence    

Annotation

kegg
ID rcu:RCOM_1495090
description hypothetical protein
nr
ID XP_012073340.1
description PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZH8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06270 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080313_010 0.0 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
2 Hb_012023_020 0.0584427086 - - hypothetical protein JCGZ_03076 [Jatropha curcas]
3 Hb_001140_350 0.0622428669 - - PREDICTED: uncharacterized protein LOC105648465 [Jatropha curcas]
4 Hb_005503_040 0.0657488978 - - PREDICTED: AMP deaminase [Jatropha curcas]
5 Hb_063716_080 0.0766608753 - - DNA-directed RNA polymerase III subunit F, putative [Ricinus communis]
6 Hb_003747_010 0.0791572831 - - hypothetical protein JCGZ_24080 [Jatropha curcas]
7 Hb_001454_320 0.079437374 - - PREDICTED: protein pleiotropic regulatory locus 1 isoform X1 [Jatropha curcas]
8 Hb_001454_280 0.081400841 - - PREDICTED: chaperone protein dnaJ 49 [Jatropha curcas]
9 Hb_005494_020 0.0816858932 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
10 Hb_000160_290 0.0828089755 - - unnamed protein product [Vitis vinifera]
11 Hb_000648_100 0.0847548699 - - PREDICTED: transcription initiation factor IIA large subunit [Jatropha curcas]
12 Hb_002960_160 0.085262348 - - PREDICTED: vacuolar protein sorting-associated protein 35B isoform X2 [Jatropha curcas]
13 Hb_000645_120 0.085298034 - - PREDICTED: ubiquitin-conjugating enzyme E2 32 [Jatropha curcas]
14 Hb_002304_090 0.0860058934 - - PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Jatropha curcas]
15 Hb_000009_480 0.0870564008 - - PREDICTED: BTB/POZ domain-containing protein At5g66560 [Jatropha curcas]
16 Hb_002174_020 0.0879497429 - - ring finger protein, putative [Ricinus communis]
17 Hb_003299_070 0.0880655485 - - AMP deaminase [Theobroma cacao]
18 Hb_164010_060 0.0883370045 - - PREDICTED: uncharacterized protein LOC105633115 [Jatropha curcas]
19 Hb_000523_040 0.0897421811 - - PREDICTED: auxin response factor 8 isoform X1 [Jatropha curcas]
20 Hb_000600_070 0.0898013568 - - PREDICTED: leucine aminopeptidase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_080313_010 Hb_080313_010 Hb_012023_020 Hb_012023_020 Hb_080313_010--Hb_012023_020 Hb_001140_350 Hb_001140_350 Hb_080313_010--Hb_001140_350 Hb_005503_040 Hb_005503_040 Hb_080313_010--Hb_005503_040 Hb_063716_080 Hb_063716_080 Hb_080313_010--Hb_063716_080 Hb_003747_010 Hb_003747_010 Hb_080313_010--Hb_003747_010 Hb_001454_320 Hb_001454_320 Hb_080313_010--Hb_001454_320 Hb_002067_120 Hb_002067_120 Hb_012023_020--Hb_002067_120 Hb_012023_020--Hb_001140_350 Hb_000645_120 Hb_000645_120 Hb_012023_020--Hb_000645_120 Hb_010931_040 Hb_010931_040 Hb_012023_020--Hb_010931_040 Hb_126295_010 Hb_126295_010 Hb_012023_020--Hb_126295_010 Hb_001454_280 Hb_001454_280 Hb_001140_350--Hb_001454_280 Hb_001140_350--Hb_000645_120 Hb_000648_100 Hb_000648_100 Hb_001140_350--Hb_000648_100 Hb_000510_310 Hb_000510_310 Hb_001140_350--Hb_000510_310 Hb_003605_130 Hb_003605_130 Hb_001140_350--Hb_003605_130 Hb_000683_070 Hb_000683_070 Hb_005503_040--Hb_000683_070 Hb_004668_060 Hb_004668_060 Hb_005503_040--Hb_004668_060 Hb_000617_100 Hb_000617_100 Hb_005503_040--Hb_000617_100 Hb_007508_080 Hb_007508_080 Hb_005503_040--Hb_007508_080 Hb_100215_010 Hb_100215_010 Hb_005503_040--Hb_100215_010 Hb_003641_060 Hb_003641_060 Hb_063716_080--Hb_003641_060 Hb_002960_160 Hb_002960_160 Hb_063716_080--Hb_002960_160 Hb_002255_030 Hb_002255_030 Hb_063716_080--Hb_002255_030 Hb_012180_050 Hb_012180_050 Hb_063716_080--Hb_012180_050 Hb_003935_030 Hb_003935_030 Hb_063716_080--Hb_003935_030 Hb_030116_020 Hb_030116_020 Hb_003747_010--Hb_030116_020 Hb_002163_010 Hb_002163_010 Hb_003747_010--Hb_002163_010 Hb_001172_010 Hb_001172_010 Hb_003747_010--Hb_001172_010 Hb_004586_180 Hb_004586_180 Hb_003747_010--Hb_004586_180 Hb_006586_050 Hb_006586_050 Hb_003747_010--Hb_006586_050 Hb_001492_010 Hb_001492_010 Hb_001454_320--Hb_001492_010 Hb_001454_320--Hb_000648_100 Hb_003124_130 Hb_003124_130 Hb_001454_320--Hb_003124_130 Hb_000160_290 Hb_000160_290 Hb_001454_320--Hb_000160_290 Hb_000796_190 Hb_000796_190 Hb_001454_320--Hb_000796_190 Hb_007558_120 Hb_007558_120 Hb_001454_320--Hb_007558_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.9308 24.931 12.4839 27.0049 34.861 41.2565
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.0428 13.4255 13.1 24.2184 10.9826

CAGE analysis