Hb_003747_010

Information

Type -
Description -
Location Contig3747: 3235-5819
Sequence    

Annotation

kegg
ID pop:POPTR_0005s08030g
description POPTRDRAFT_207518; hypothetical protein
nr
ID KDP46871.1
description hypothetical protein JCGZ_24080 [Jatropha curcas]
swissprot
ID Q7Z9L3
description Glucan 1,3-beta-glucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=exgA PE=1 SV=1
trembl
ID A0A067LEH2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24080 PE=3 SV=1
Gene Ontology
ID GO:0004553
description probable glucan -beta-glucosidase a isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38201: 3319-5812
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003747_010 0.0 - - hypothetical protein JCGZ_24080 [Jatropha curcas]
2 Hb_030116_020 0.0679125998 - - hypothetical protein POPTR_0016s13630g [Populus trichocarpa]
3 Hb_080313_010 0.0791572831 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
4 Hb_002163_010 0.0804128964 - - PREDICTED: UBA and UBX domain-containing protein At4g15410 [Jatropha curcas]
5 Hb_001172_010 0.0814787627 - - PREDICTED: probable serine/threonine-protein kinase At4g35230 [Jatropha curcas]
6 Hb_004586_180 0.082020524 - - hypothetical protein JCGZ_15866 [Jatropha curcas]
7 Hb_006586_050 0.085112232 - - PREDICTED: probable protein phosphatase 2C 39 [Jatropha curcas]
8 Hb_000009_480 0.0884411267 - - PREDICTED: BTB/POZ domain-containing protein At5g66560 [Jatropha curcas]
9 Hb_164010_060 0.0901398199 - - PREDICTED: uncharacterized protein LOC105633115 [Jatropha curcas]
10 Hb_001140_350 0.0904001816 - - PREDICTED: uncharacterized protein LOC105648465 [Jatropha curcas]
11 Hb_000347_280 0.0922655754 - - PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Populus euphratica]
12 Hb_000244_220 0.1004442368 - - PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like [Jatropha curcas]
13 Hb_007520_030 0.1007083501 - - PREDICTED: peroxisomal membrane protein PEX14 [Jatropha curcas]
14 Hb_003299_070 0.1007744377 - - AMP deaminase [Theobroma cacao]
15 Hb_004974_010 0.1010679199 - - PREDICTED: F-box/kelch-repeat protein At3g23880-like [Prunus mume]
16 Hb_005503_040 0.1022047752 - - PREDICTED: AMP deaminase [Jatropha curcas]
17 Hb_005122_080 0.1031331449 - - prokaryotic DNA topoisomerase, putative [Ricinus communis]
18 Hb_000300_440 0.1043058088 - - MIF4G domain and MA3 domain-containing protein isoform 1 [Theobroma cacao]
19 Hb_001454_320 0.1043817432 - - PREDICTED: protein pleiotropic regulatory locus 1 isoform X1 [Jatropha curcas]
20 Hb_000160_040 0.1050798301 - - PREDICTED: methyltransferase-like protein 10 [Jatropha curcas]

Gene co-expression network

sample Hb_003747_010 Hb_003747_010 Hb_030116_020 Hb_030116_020 Hb_003747_010--Hb_030116_020 Hb_080313_010 Hb_080313_010 Hb_003747_010--Hb_080313_010 Hb_002163_010 Hb_002163_010 Hb_003747_010--Hb_002163_010 Hb_001172_010 Hb_001172_010 Hb_003747_010--Hb_001172_010 Hb_004586_180 Hb_004586_180 Hb_003747_010--Hb_004586_180 Hb_006586_050 Hb_006586_050 Hb_003747_010--Hb_006586_050 Hb_030116_020--Hb_001172_010 Hb_000700_140 Hb_000700_140 Hb_030116_020--Hb_000700_140 Hb_000123_210 Hb_000123_210 Hb_030116_020--Hb_000123_210 Hb_033834_060 Hb_033834_060 Hb_030116_020--Hb_033834_060 Hb_106371_010 Hb_106371_010 Hb_030116_020--Hb_106371_010 Hb_012023_020 Hb_012023_020 Hb_080313_010--Hb_012023_020 Hb_001140_350 Hb_001140_350 Hb_080313_010--Hb_001140_350 Hb_005503_040 Hb_005503_040 Hb_080313_010--Hb_005503_040 Hb_063716_080 Hb_063716_080 Hb_080313_010--Hb_063716_080 Hb_001454_320 Hb_001454_320 Hb_080313_010--Hb_001454_320 Hb_000594_040 Hb_000594_040 Hb_002163_010--Hb_000594_040 Hb_003299_070 Hb_003299_070 Hb_002163_010--Hb_003299_070 Hb_031042_070 Hb_031042_070 Hb_002163_010--Hb_031042_070 Hb_001633_040 Hb_001633_040 Hb_002163_010--Hb_001633_040 Hb_003935_030 Hb_003935_030 Hb_002163_010--Hb_003935_030 Hb_002163_010--Hb_001454_320 Hb_009627_010 Hb_009627_010 Hb_001172_010--Hb_009627_010 Hb_002304_090 Hb_002304_090 Hb_001172_010--Hb_002304_090 Hb_004429_100 Hb_004429_100 Hb_001172_010--Hb_004429_100 Hb_001172_010--Hb_033834_060 Hb_007520_030 Hb_007520_030 Hb_001172_010--Hb_007520_030 Hb_000160_040 Hb_000160_040 Hb_001172_010--Hb_000160_040 Hb_164010_060 Hb_164010_060 Hb_004586_180--Hb_164010_060 Hb_004108_140 Hb_004108_140 Hb_004586_180--Hb_004108_140 Hb_026099_010 Hb_026099_010 Hb_004586_180--Hb_026099_010 Hb_004586_180--Hb_106371_010 Hb_185679_010 Hb_185679_010 Hb_004586_180--Hb_185679_010 Hb_000523_040 Hb_000523_040 Hb_006586_050--Hb_000523_040 Hb_000510_310 Hb_000510_310 Hb_006586_050--Hb_000510_310 Hb_000059_210 Hb_000059_210 Hb_006586_050--Hb_000059_210 Hb_000521_260 Hb_000521_260 Hb_006586_050--Hb_000521_260 Hb_000032_320 Hb_000032_320 Hb_006586_050--Hb_000032_320 Hb_006586_050--Hb_164010_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
52.2244 32.9971 14.3053 28.9519 49.0692 48.218
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
36.4202 17.6258 20.7552 44.7933 9.24029

CAGE analysis