Hb_004586_180

Information

Type -
Description -
Location Contig4586: 203537-205637
Sequence    

Annotation

kegg
ID rcu:RCOM_1039090
description 14-3-3 protein, putative
nr
ID KDP41459.1
description hypothetical protein JCGZ_15866 [Jatropha curcas]
swissprot
ID Q96451
description 14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1
trembl
ID A0A067LBG5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15866 PE=3 SV=1
Gene Ontology
ID GO:0019904
description 14-3-3-like protein b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43536: 203491-205504
cDNA
(Sanger)
(ID:Location)		 039_J01.ab1: 203491-205065

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004586_180 0.0 - - hypothetical protein JCGZ_15866 [Jatropha curcas]
2 Hb_164010_060 0.0652109587 - - PREDICTED: uncharacterized protein LOC105633115 [Jatropha curcas]
3 Hb_004108_140 0.0819342784 - - PREDICTED: HUA2-like protein 3 isoform X3 [Jatropha curcas]
4 Hb_003747_010 0.082020524 - - hypothetical protein JCGZ_24080 [Jatropha curcas]
5 Hb_026099_010 0.0856820212 - - PREDICTED: E3 ubiquitin-protein ligase RHF2A isoform X2 [Jatropha curcas]
6 Hb_106371_010 0.0870963037 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
7 Hb_185679_010 0.0907796979 - - serine/threonine-protein kinase rio2, putative [Ricinus communis]
8 Hb_000347_280 0.0909495831 - - PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Populus euphratica]
9 Hb_004577_020 0.0952191086 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
10 Hb_176152_010 0.0964494825 - - Myosin heavy chain, fast skeletal muscle, embryonic, putative [Ricinus communis]
11 Hb_000160_040 0.0965263752 - - PREDICTED: methyltransferase-like protein 10 [Jatropha curcas]
12 Hb_003090_080 0.0971713526 transcription factor TF Family: MYB PREDICTED: myb-like protein B [Jatropha curcas]
13 Hb_002044_060 0.0971981805 - - elongation factor ts, putative [Ricinus communis]
14 Hb_003020_110 0.0980757905 - - PREDICTED: serine/arginine repetitive matrix protein 1 isoform X2 [Populus euphratica]
15 Hb_000645_150 0.0987174259 - - zinc finger protein, putative [Ricinus communis]
16 Hb_080313_010 0.0989200966 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
17 Hb_000768_110 0.1007831279 - - PREDICTED: chromo domain-containing protein LHP1 isoform X1 [Jatropha curcas]
18 Hb_003581_120 0.1010108929 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
19 Hb_030385_010 0.1011662536 - - PREDICTED: zinc-binding alcohol dehydrogenase domain-containing protein 2-like [Jatropha curcas]
20 Hb_000879_140 0.101751751 - - PREDICTED: uncharacterized protein DDB_G0283697-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_004586_180 Hb_004586_180 Hb_164010_060 Hb_164010_060 Hb_004586_180--Hb_164010_060 Hb_004108_140 Hb_004108_140 Hb_004586_180--Hb_004108_140 Hb_003747_010 Hb_003747_010 Hb_004586_180--Hb_003747_010 Hb_026099_010 Hb_026099_010 Hb_004586_180--Hb_026099_010 Hb_106371_010 Hb_106371_010 Hb_004586_180--Hb_106371_010 Hb_185679_010 Hb_185679_010 Hb_004586_180--Hb_185679_010 Hb_003020_110 Hb_003020_110 Hb_164010_060--Hb_003020_110 Hb_006586_050 Hb_006586_050 Hb_164010_060--Hb_006586_050 Hb_007590_080 Hb_007590_080 Hb_164010_060--Hb_007590_080 Hb_007632_020 Hb_007632_020 Hb_164010_060--Hb_007632_020 Hb_063716_080 Hb_063716_080 Hb_164010_060--Hb_063716_080 Hb_004108_140--Hb_026099_010 Hb_004108_140--Hb_185679_010 Hb_003994_240 Hb_003994_240 Hb_004108_140--Hb_003994_240 Hb_001936_020 Hb_001936_020 Hb_004108_140--Hb_001936_020 Hb_003935_030 Hb_003935_030 Hb_004108_140--Hb_003935_030 Hb_004370_030 Hb_004370_030 Hb_004108_140--Hb_004370_030 Hb_030116_020 Hb_030116_020 Hb_003747_010--Hb_030116_020 Hb_080313_010 Hb_080313_010 Hb_003747_010--Hb_080313_010 Hb_002163_010 Hb_002163_010 Hb_003747_010--Hb_002163_010 Hb_001172_010 Hb_001172_010 Hb_003747_010--Hb_001172_010 Hb_003747_010--Hb_006586_050 Hb_001221_040 Hb_001221_040 Hb_026099_010--Hb_001221_040 Hb_002044_060 Hb_002044_060 Hb_026099_010--Hb_002044_060 Hb_026099_010--Hb_004370_030 Hb_000789_080 Hb_000789_080 Hb_026099_010--Hb_000789_080 Hb_000046_440 Hb_000046_440 Hb_026099_010--Hb_000046_440 Hb_003090_080 Hb_003090_080 Hb_106371_010--Hb_003090_080 Hb_000160_040 Hb_000160_040 Hb_106371_010--Hb_000160_040 Hb_001790_020 Hb_001790_020 Hb_106371_010--Hb_001790_020 Hb_016898_010 Hb_016898_010 Hb_106371_010--Hb_016898_010 Hb_033834_060 Hb_033834_060 Hb_106371_010--Hb_033834_060 Hb_003952_150 Hb_003952_150 Hb_106371_010--Hb_003952_150 Hb_185679_010--Hb_003935_030 Hb_003299_070 Hb_003299_070 Hb_185679_010--Hb_003299_070 Hb_185679_010--Hb_002044_060 Hb_185679_010--Hb_026099_010 Hb_005914_060 Hb_005914_060 Hb_185679_010--Hb_005914_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
334.624 193.713 58.5683 157.093 317.244 316.578
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
257.026 179.693 104.703 225.936 84.9567

CAGE analysis