Hb_164010_060

Information

Type -
Description -
Location Contig164010: 39996-44113
Sequence    

Annotation

kegg
ID rcu:RCOM_0522880
description hypothetical protein
nr
ID XP_012071049.1
description PREDICTED: uncharacterized protein LOC105633115 [Jatropha curcas]
swissprot
ID A5DK49
description Altered inheritance of mitochondria protein 32 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=AIM32 PE=3 SV=2
trembl
ID A0A067KSX0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01058 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15078: 40072-43954 , PASA_asmbl_15079: 41020-43595 , PASA_asmbl_15081: 43221-43499
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164010_060 0.0 - - PREDICTED: uncharacterized protein LOC105633115 [Jatropha curcas]
2 Hb_003020_110 0.0650119119 - - PREDICTED: serine/arginine repetitive matrix protein 1 isoform X2 [Populus euphratica]
3 Hb_004586_180 0.0652109587 - - hypothetical protein JCGZ_15866 [Jatropha curcas]
4 Hb_006586_050 0.0773336519 - - PREDICTED: probable protein phosphatase 2C 39 [Jatropha curcas]
5 Hb_007590_080 0.0799778583 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Malus domestica]
6 Hb_007632_020 0.0802385996 - - PREDICTED: dnaJ homolog subfamily C member 17 [Jatropha curcas]
7 Hb_063716_080 0.0820948336 - - DNA-directed RNA polymerase III subunit F, putative [Ricinus communis]
8 Hb_007336_020 0.0837444368 - - Mannose-P-dolichol utilization defect 1 protein, putative [Ricinus communis]
9 Hb_003581_120 0.0846005653 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
10 Hb_001252_010 0.0853518189 - - hypothetical protein JCGZ_01389 [Jatropha curcas]
11 Hb_008695_120 0.0866888504 transcription factor TF Family: C2H2 PREDICTED: MYST-like histone acetyltransferase 2 [Jatropha curcas]
12 Hb_080313_010 0.0883370045 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
13 Hb_007520_030 0.0883373468 - - PREDICTED: peroxisomal membrane protein PEX14 [Jatropha curcas]
14 Hb_003747_010 0.0901398199 - - hypothetical protein JCGZ_24080 [Jatropha curcas]
15 Hb_002163_010 0.0908277418 - - PREDICTED: UBA and UBX domain-containing protein At4g15410 [Jatropha curcas]
16 Hb_003935_030 0.0911911832 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]
17 Hb_002255_030 0.0912196578 - - PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
18 Hb_000347_280 0.0914938534 - - PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Populus euphratica]
19 Hb_011942_080 0.0918113575 - - PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
20 Hb_185679_010 0.0918616887 - - serine/threonine-protein kinase rio2, putative [Ricinus communis]

Gene co-expression network

sample Hb_164010_060 Hb_164010_060 Hb_003020_110 Hb_003020_110 Hb_164010_060--Hb_003020_110 Hb_004586_180 Hb_004586_180 Hb_164010_060--Hb_004586_180 Hb_006586_050 Hb_006586_050 Hb_164010_060--Hb_006586_050 Hb_007590_080 Hb_007590_080 Hb_164010_060--Hb_007590_080 Hb_007632_020 Hb_007632_020 Hb_164010_060--Hb_007632_020 Hb_063716_080 Hb_063716_080 Hb_164010_060--Hb_063716_080 Hb_000343_210 Hb_000343_210 Hb_003020_110--Hb_000343_210 Hb_000342_110 Hb_000342_110 Hb_003020_110--Hb_000342_110 Hb_003581_120 Hb_003581_120 Hb_003020_110--Hb_003581_120 Hb_002400_180 Hb_002400_180 Hb_003020_110--Hb_002400_180 Hb_031042_070 Hb_031042_070 Hb_003020_110--Hb_031042_070 Hb_004108_140 Hb_004108_140 Hb_004586_180--Hb_004108_140 Hb_003747_010 Hb_003747_010 Hb_004586_180--Hb_003747_010 Hb_026099_010 Hb_026099_010 Hb_004586_180--Hb_026099_010 Hb_106371_010 Hb_106371_010 Hb_004586_180--Hb_106371_010 Hb_185679_010 Hb_185679_010 Hb_004586_180--Hb_185679_010 Hb_000523_040 Hb_000523_040 Hb_006586_050--Hb_000523_040 Hb_000510_310 Hb_000510_310 Hb_006586_050--Hb_000510_310 Hb_000059_210 Hb_000059_210 Hb_006586_050--Hb_000059_210 Hb_000521_260 Hb_000521_260 Hb_006586_050--Hb_000521_260 Hb_000032_320 Hb_000032_320 Hb_006586_050--Hb_000032_320 Hb_007336_020 Hb_007336_020 Hb_007590_080--Hb_007336_020 Hb_002007_350 Hb_002007_350 Hb_007590_080--Hb_002007_350 Hb_007894_140 Hb_007894_140 Hb_007590_080--Hb_007894_140 Hb_008253_010 Hb_008253_010 Hb_007590_080--Hb_008253_010 Hb_000100_070 Hb_000100_070 Hb_007590_080--Hb_000100_070 Hb_000803_300 Hb_000803_300 Hb_007590_080--Hb_000803_300 Hb_011609_080 Hb_011609_080 Hb_007632_020--Hb_011609_080 Hb_007632_020--Hb_007590_080 Hb_007632_020--Hb_031042_070 Hb_007632_020--Hb_026099_010 Hb_010931_080 Hb_010931_080 Hb_007632_020--Hb_010931_080 Hb_004370_030 Hb_004370_030 Hb_007632_020--Hb_004370_030 Hb_003641_060 Hb_003641_060 Hb_063716_080--Hb_003641_060 Hb_002960_160 Hb_002960_160 Hb_063716_080--Hb_002960_160 Hb_002255_030 Hb_002255_030 Hb_063716_080--Hb_002255_030 Hb_012180_050 Hb_012180_050 Hb_063716_080--Hb_012180_050 Hb_080313_010 Hb_080313_010 Hb_063716_080--Hb_080313_010 Hb_003935_030 Hb_003935_030 Hb_063716_080--Hb_003935_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
58.3024 38.4108 14.5836 26.3281 48.1595 48.1067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
39.001 26.1236 19.6343 26.5017 13.0039

CAGE analysis