Hb_001492_010

Information

Type -
Description -
Location Contig1492: 82563-84147
Sequence    

Annotation

kegg
ID pop:POPTR_0006s188901
description POPTRDRAFT_819393; hypothetical protein
nr
ID XP_011018132.1
description PREDICTED: diacylglycerol kinase 3-like isoform X2 [Populus euphratica]
swissprot
ID Q10024
description Putative diacylglycerol kinase K06A1.6 OS=Caenorhabditis elegans GN=dgk-5 PE=3 SV=2
trembl
ID A0A067F8B9
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0105072mg PE=4 SV=1
Gene Ontology
ID GO:0004143
description diacylglycerol kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12418: 82501-103357
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001492_010 0.0 - - PREDICTED: diacylglycerol kinase 3-like isoform X2 [Populus euphratica]
2 Hb_001454_320 0.0558108235 - - PREDICTED: protein pleiotropic regulatory locus 1 isoform X1 [Jatropha curcas]
3 Hb_000215_190 0.0636094862 - - PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Jatropha curcas]
4 Hb_000120_620 0.0814627963 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1a isoform X1 [Jatropha curcas]
5 Hb_000331_160 0.0861780273 - - adenylate kinase 1 chloroplast, putative [Ricinus communis]
6 Hb_000160_290 0.0884235701 - - unnamed protein product [Vitis vinifera]
7 Hb_003124_130 0.0890345612 - - PREDICTED: KH domain-containing protein At4g18375 isoform X1 [Jatropha curcas]
8 Hb_000120_610 0.0925232362 - - mitotic control protein dis3, putative [Ricinus communis]
9 Hb_080313_010 0.0934611105 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
10 Hb_000261_290 0.0942647568 - - eukaryotic translation elongation factor 1-alpha [Hevea brasiliensis]
11 Hb_003299_070 0.0944469294 - - AMP deaminase [Theobroma cacao]
12 Hb_000158_130 0.0946411145 - - PREDICTED: uncharacterized protein LOC105647950 isoform X1 [Jatropha curcas]
13 Hb_004899_070 0.0949674665 - - PREDICTED: RRP12-like protein [Jatropha curcas]
14 Hb_004032_180 0.0951168741 - - PREDICTED: myosin heavy chain, non-muscle [Jatropha curcas]
15 Hb_000098_130 0.0968916432 - - PREDICTED: serine/threonine-protein kinase SRK2A [Jatropha curcas]
16 Hb_000703_210 0.0971756226 - - Inactive protein kinase [Gossypium arboreum]
17 Hb_001221_150 0.0975919877 - - AMP-activated protein kinase, gamma regulatory subunit, putative [Ricinus communis]
18 Hb_000648_100 0.0976402252 - - PREDICTED: transcription initiation factor IIA large subunit [Jatropha curcas]
19 Hb_001085_320 0.0979589888 transcription factor TF Family: LUG WD-repeat protein, putative [Ricinus communis]
20 Hb_002374_320 0.0987412502 - - hypothetical protein JCGZ_12107 [Jatropha curcas]

Gene co-expression network

sample Hb_001492_010 Hb_001492_010 Hb_001454_320 Hb_001454_320 Hb_001492_010--Hb_001454_320 Hb_000215_190 Hb_000215_190 Hb_001492_010--Hb_000215_190 Hb_000120_620 Hb_000120_620 Hb_001492_010--Hb_000120_620 Hb_000331_160 Hb_000331_160 Hb_001492_010--Hb_000331_160 Hb_000160_290 Hb_000160_290 Hb_001492_010--Hb_000160_290 Hb_003124_130 Hb_003124_130 Hb_001492_010--Hb_003124_130 Hb_000648_100 Hb_000648_100 Hb_001454_320--Hb_000648_100 Hb_001454_320--Hb_003124_130 Hb_001454_320--Hb_000160_290 Hb_000796_190 Hb_000796_190 Hb_001454_320--Hb_000796_190 Hb_007558_120 Hb_007558_120 Hb_001454_320--Hb_007558_120 Hb_000215_190--Hb_001454_320 Hb_000836_270 Hb_000836_270 Hb_000215_190--Hb_000836_270 Hb_000158_130 Hb_000158_130 Hb_000215_190--Hb_000158_130 Hb_000215_190--Hb_003124_130 Hb_000645_120 Hb_000645_120 Hb_000215_190--Hb_000645_120 Hb_004899_070 Hb_004899_070 Hb_000120_620--Hb_004899_070 Hb_004970_160 Hb_004970_160 Hb_000120_620--Hb_004970_160 Hb_000098_130 Hb_000098_130 Hb_000120_620--Hb_000098_130 Hb_003097_180 Hb_003097_180 Hb_000120_620--Hb_003097_180 Hb_000261_290 Hb_000261_290 Hb_000120_620--Hb_000261_290 Hb_001178_150 Hb_001178_150 Hb_000120_620--Hb_001178_150 Hb_000640_020 Hb_000640_020 Hb_000331_160--Hb_000640_020 Hb_032202_240 Hb_032202_240 Hb_000331_160--Hb_032202_240 Hb_002326_020 Hb_002326_020 Hb_000331_160--Hb_002326_020 Hb_023020_060 Hb_023020_060 Hb_000331_160--Hb_023020_060 Hb_000504_160 Hb_000504_160 Hb_000331_160--Hb_000504_160 Hb_002174_020 Hb_002174_020 Hb_000160_290--Hb_002174_020 Hb_000922_370 Hb_000922_370 Hb_000160_290--Hb_000922_370 Hb_001417_050 Hb_001417_050 Hb_000160_290--Hb_001417_050 Hb_002235_160 Hb_002235_160 Hb_000160_290--Hb_002235_160 Hb_003044_020 Hb_003044_020 Hb_000160_290--Hb_003044_020 Hb_001493_040 Hb_001493_040 Hb_000160_290--Hb_001493_040 Hb_000567_010 Hb_000567_010 Hb_003124_130--Hb_000567_010 Hb_003124_130--Hb_000796_190 Hb_147737_010 Hb_147737_010 Hb_003124_130--Hb_147737_010 Hb_003124_130--Hb_000158_130 Hb_003124_130--Hb_000160_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.0489 25.9126 13.224 16.4474 30.8298 33.1099
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.9636 4.78437 9.13903 19.4955 6.62446

CAGE analysis