Hb_001486_070

Information

Type -
Description -
Location Contig1486: 43622-47432
Sequence    

Annotation

kegg
ID rcu:RCOM_1120970
description hypothetical protein
nr
ID XP_012070440.1
description PREDICTED: 5'-adenylylsulfate reductase-like 7 [Jatropha curcas]
swissprot
ID Q93YX4
description 5'-adenylylsulfate reductase-like 5 OS=Arabidopsis thaliana GN=APRL5 PE=2 SV=1
trembl
ID A0A067L6J5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02714 PE=4 SV=1
Gene Ontology
ID GO:0005623
description 5 -adenylylsulfate reductase-like 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12223: 43667-47341
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001486_070 0.0 - - PREDICTED: 5'-adenylylsulfate reductase-like 7 [Jatropha curcas]
2 Hb_000345_360 0.0863476494 - - PREDICTED: protein AUXIN RESPONSE 4 [Jatropha curcas]
3 Hb_004875_030 0.0923928615 - - PREDICTED: signal peptide peptidase-like 2 [Jatropha curcas]
4 Hb_001366_210 0.0928000681 - - cathepsin B, putative [Ricinus communis]
5 Hb_000990_090 0.0982119033 - - PREDICTED: ER membrane protein complex subunit 1 [Jatropha curcas]
6 Hb_000139_130 0.107672309 - - PREDICTED: chloride channel protein CLC-d isoform X1 [Jatropha curcas]
7 Hb_078477_050 0.1077498072 transcription factor TF Family: Orphans PREDICTED: uncharacterized protein LOC105648332 isoform X1 [Jatropha curcas]
8 Hb_010697_040 0.1085095649 - - PREDICTED: protein GPR107 isoform X1 [Jatropha curcas]
9 Hb_005503_040 0.1114942691 - - PREDICTED: AMP deaminase [Jatropha curcas]
10 Hb_004223_290 0.1117098712 - - PREDICTED: protein IQ-DOMAIN 32 [Jatropha curcas]
11 Hb_004531_120 0.1122284124 - - PREDICTED: uncharacterized protein LOC105635025 [Jatropha curcas]
12 Hb_009529_030 0.1134933939 - - PREDICTED: transmembrane protein 120 homolog [Jatropha curcas]
13 Hb_005731_090 0.1137387758 - - PREDICTED: uncharacterized protein LOC105630164 [Jatropha curcas]
14 Hb_007508_080 0.1142621577 - - PREDICTED: presenilin-like protein At2g29900 [Jatropha curcas]
15 Hb_027760_070 0.1156774908 - - PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Jatropha curcas]
16 Hb_000048_060 0.1176395792 - - PREDICTED: probable apyrase 7 isoform X1 [Jatropha curcas]
17 Hb_000261_100 0.1181152603 - - PREDICTED: beta-galactosidase 9 isoform X2 [Jatropha curcas]
18 Hb_008749_030 0.118853388 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
19 Hb_001500_110 0.1191806092 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_002391_290 0.1193230953 - - PREDICTED: bifunctional nuclease 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001486_070 Hb_001486_070 Hb_000345_360 Hb_000345_360 Hb_001486_070--Hb_000345_360 Hb_004875_030 Hb_004875_030 Hb_001486_070--Hb_004875_030 Hb_001366_210 Hb_001366_210 Hb_001486_070--Hb_001366_210 Hb_000990_090 Hb_000990_090 Hb_001486_070--Hb_000990_090 Hb_000139_130 Hb_000139_130 Hb_001486_070--Hb_000139_130 Hb_078477_050 Hb_078477_050 Hb_001486_070--Hb_078477_050 Hb_000345_360--Hb_004875_030 Hb_000345_360--Hb_000990_090 Hb_004223_290 Hb_004223_290 Hb_000345_360--Hb_004223_290 Hb_009529_030 Hb_009529_030 Hb_000345_360--Hb_009529_030 Hb_002391_290 Hb_002391_290 Hb_000345_360--Hb_002391_290 Hb_041828_010 Hb_041828_010 Hb_000345_360--Hb_041828_010 Hb_004875_030--Hb_004223_290 Hb_004875_030--Hb_000990_090 Hb_002044_050 Hb_002044_050 Hb_004875_030--Hb_002044_050 Hb_004875_030--Hb_009529_030 Hb_005731_090 Hb_005731_090 Hb_001366_210--Hb_005731_090 Hb_030627_060 Hb_030627_060 Hb_001366_210--Hb_030627_060 Hb_007635_030 Hb_007635_030 Hb_001366_210--Hb_007635_030 Hb_000375_130 Hb_000375_130 Hb_001366_210--Hb_000375_130 Hb_001454_280 Hb_001454_280 Hb_001366_210--Hb_001454_280 Hb_002174_020 Hb_002174_020 Hb_001366_210--Hb_002174_020 Hb_000990_090--Hb_002391_290 Hb_000990_090--Hb_009529_030 Hb_000785_040 Hb_000785_040 Hb_000990_090--Hb_000785_040 Hb_004545_090 Hb_004545_090 Hb_000990_090--Hb_004545_090 Hb_001033_050 Hb_001033_050 Hb_000139_130--Hb_001033_050 Hb_004109_230 Hb_004109_230 Hb_000139_130--Hb_004109_230 Hb_004668_060 Hb_004668_060 Hb_000139_130--Hb_004668_060 Hb_001377_160 Hb_001377_160 Hb_000139_130--Hb_001377_160 Hb_061878_010 Hb_061878_010 Hb_000139_130--Hb_061878_010 Hb_004109_370 Hb_004109_370 Hb_000139_130--Hb_004109_370 Hb_008177_030 Hb_008177_030 Hb_078477_050--Hb_008177_030 Hb_001140_350 Hb_001140_350 Hb_078477_050--Hb_001140_350 Hb_078477_050--Hb_001366_210 Hb_002111_060 Hb_002111_060 Hb_078477_050--Hb_002111_060 Hb_080313_010 Hb_080313_010 Hb_078477_050--Hb_080313_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
36.4869 26.8161 9.18332 45.5164 34.2703 36.285
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.1502 11.3964 11.423 27.9049 22.0639

CAGE analysis