Hb_049717_010

Information

Type -
Description -
Location Contig49717: 13-627
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012487759.1
description PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
swissprot
ID -
description -
trembl
ID A0A067LNH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13470 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_049717_010 0.0 - - PREDICTED: uncharacterized protein LOC105800955 [Gossypium raimondii]
2 Hb_158869_010 0.2135355894 - - PREDICTED: uncharacterized protein LOC105778995 [Gossypium raimondii]
3 Hb_003813_160 0.3073352656 - - -
4 Hb_002874_040 0.3094981801 - - -
5 Hb_001623_600 0.3127380305 - - PREDICTED: uncharacterized protein LOC104748784 [Camelina sativa]
6 Hb_035935_010 0.3140900391 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
7 Hb_057207_010 0.3350630048 - - hypothetical protein F383_17010 [Gossypium arboreum]
8 Hb_003435_010 0.3495408082 - - PREDICTED: ras-related protein RABC2a-like [Jatropha curcas]
9 Hb_000752_050 0.3572536847 - - PREDICTED: uncharacterized protein LOC102610887 [Citrus sinensis]
10 Hb_001369_240 0.360409531 - - -
11 Hb_020378_050 0.3650203062 - - -
12 Hb_107504_010 0.3858950574 - - -
13 Hb_002685_180 0.3866181592 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
14 Hb_001204_020 0.3875688866 - - Uncharacterized protein TCM_021965 [Theobroma cacao]
15 Hb_028751_020 0.3891387689 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
16 Hb_006452_230 0.3912558365 - - PREDICTED: uncharacterized protein LOC105635044 [Jatropha curcas]
17 Hb_001579_240 0.3919831132 - - galactinol synthase [Manihot esculenta]
18 Hb_001882_060 0.3964439658 - - -
19 Hb_018202_030 0.3981707901 - - PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
20 Hb_035905_010 0.4000858153 - - PREDICTED: uncharacterized protein LOC105627956 [Jatropha curcas]

Gene co-expression network

sample Hb_049717_010 Hb_049717_010 Hb_158869_010 Hb_158869_010 Hb_049717_010--Hb_158869_010 Hb_003813_160 Hb_003813_160 Hb_049717_010--Hb_003813_160 Hb_002874_040 Hb_002874_040 Hb_049717_010--Hb_002874_040 Hb_001623_600 Hb_001623_600 Hb_049717_010--Hb_001623_600 Hb_035935_010 Hb_035935_010 Hb_049717_010--Hb_035935_010 Hb_057207_010 Hb_057207_010 Hb_049717_010--Hb_057207_010 Hb_158869_010--Hb_035935_010 Hb_002240_080 Hb_002240_080 Hb_158869_010--Hb_002240_080 Hb_020378_050 Hb_020378_050 Hb_158869_010--Hb_020378_050 Hb_107504_010 Hb_107504_010 Hb_158869_010--Hb_107504_010 Hb_082730_010 Hb_082730_010 Hb_158869_010--Hb_082730_010 Hb_001233_040 Hb_001233_040 Hb_003813_160--Hb_001233_040 Hb_001604_050 Hb_001604_050 Hb_003813_160--Hb_001604_050 Hb_033661_010 Hb_033661_010 Hb_003813_160--Hb_033661_010 Hb_184403_020 Hb_184403_020 Hb_003813_160--Hb_184403_020 Hb_000753_190 Hb_000753_190 Hb_003813_160--Hb_000753_190 Hb_011249_050 Hb_011249_050 Hb_003813_160--Hb_011249_050 Hb_000052_020 Hb_000052_020 Hb_002874_040--Hb_000052_020 Hb_002918_050 Hb_002918_050 Hb_002874_040--Hb_002918_050 Hb_002888_020 Hb_002888_020 Hb_002874_040--Hb_002888_020 Hb_003734_110 Hb_003734_110 Hb_002874_040--Hb_003734_110 Hb_007426_160 Hb_007426_160 Hb_002874_040--Hb_007426_160 Hb_000012_160 Hb_000012_160 Hb_002874_040--Hb_000012_160 Hb_000445_200 Hb_000445_200 Hb_001623_600--Hb_000445_200 Hb_001623_600--Hb_057207_010 Hb_000387_090 Hb_000387_090 Hb_001623_600--Hb_000387_090 Hb_104721_010 Hb_104721_010 Hb_001623_600--Hb_104721_010 Hb_003487_010 Hb_003487_010 Hb_001623_600--Hb_003487_010 Hb_001623_600--Hb_002874_040 Hb_035935_010--Hb_001233_040 Hb_006869_010 Hb_006869_010 Hb_035935_010--Hb_006869_010 Hb_035935_010--Hb_003813_160 Hb_003683_080 Hb_003683_080 Hb_035935_010--Hb_003683_080 Hb_126044_010 Hb_126044_010 Hb_057207_010--Hb_126044_010 Hb_001335_050 Hb_001335_050 Hb_057207_010--Hb_001335_050 Hb_107221_010 Hb_107221_010 Hb_057207_010--Hb_107221_010 Hb_005654_010 Hb_005654_010 Hb_057207_010--Hb_005654_010 Hb_007064_030 Hb_007064_030 Hb_057207_010--Hb_007064_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.106387 0 0 0 0.0422288 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.292062 0.0765157 0 0.0940013 0.148651

CAGE analysis