Hb_037063_010

Information

Type -
Description -
Location Contig37063: 3732-6974
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_037063_010 0.0 - - -
2 Hb_005709_010 0.1952383181 - - DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
3 Hb_057098_010 0.2029253001 - - -
4 Hb_010407_170 0.2144818354 - - PREDICTED: actin-depolymerizing factor-like [Jatropha curcas]
5 Hb_004785_040 0.2201176131 - - PREDICTED: abscisic acid 8'-hydroxylase 3-like [Jatropha curcas]
6 Hb_011861_120 0.2215548291 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
7 Hb_001541_040 0.2297722117 - - cytochrome P450, putative [Ricinus communis]
8 Hb_000796_240 0.2345789902 - - -
9 Hb_002346_010 0.2348272233 - - -
10 Hb_001638_090 0.2422331737 - - GRF1-INTERACTING FACTOR 2 family protein [Populus trichocarpa]
11 Hb_003581_080 0.2433646537 - - PREDICTED: protein NRT1/ PTR FAMILY 4.6 [Jatropha curcas]
12 Hb_002400_350 0.2435153094 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
13 Hb_000098_290 0.2455614677 - - -
14 Hb_089497_010 0.2461194299 - - PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15-like isoform X3 [Jatropha curcas]
15 Hb_004136_040 0.246286875 - - putative protein kinase [Arabidopsis thaliana]
16 Hb_007125_040 0.2479449555 - - PREDICTED: cationic amino acid transporter 1-like [Jatropha curcas]
17 Hb_112023_010 0.2489320075 - - hypothetical protein EUGRSUZ_C03826 [Eucalyptus grandis]
18 Hb_002217_420 0.24903371 - - hypothetical protein EUTSA_v10021493mg [Eutrema salsugineum]
19 Hb_007423_050 0.2533077492 - - PREDICTED: cysteine-rich receptor-like protein kinase 3 [Jatropha curcas]
20 Hb_001117_070 0.2589333989 - - 30S ribosomal protein S19, putative [Ricinus communis]

Gene co-expression network

sample Hb_037063_010 Hb_037063_010 Hb_005709_010 Hb_005709_010 Hb_037063_010--Hb_005709_010 Hb_057098_010 Hb_057098_010 Hb_037063_010--Hb_057098_010 Hb_010407_170 Hb_010407_170 Hb_037063_010--Hb_010407_170 Hb_004785_040 Hb_004785_040 Hb_037063_010--Hb_004785_040 Hb_011861_120 Hb_011861_120 Hb_037063_010--Hb_011861_120 Hb_001541_040 Hb_001541_040 Hb_037063_010--Hb_001541_040 Hb_186725_010 Hb_186725_010 Hb_005709_010--Hb_186725_010 Hb_005539_340 Hb_005539_340 Hb_005709_010--Hb_005539_340 Hb_000796_240 Hb_000796_240 Hb_005709_010--Hb_000796_240 Hb_000526_030 Hb_000526_030 Hb_005709_010--Hb_000526_030 Hb_031403_020 Hb_031403_020 Hb_005709_010--Hb_031403_020 Hb_001638_090 Hb_001638_090 Hb_057098_010--Hb_001638_090 Hb_005539_020 Hb_005539_020 Hb_057098_010--Hb_005539_020 Hb_000098_290 Hb_000098_290 Hb_057098_010--Hb_000098_290 Hb_011249_050 Hb_011249_050 Hb_057098_010--Hb_011249_050 Hb_057098_010--Hb_000796_240 Hb_001104_110 Hb_001104_110 Hb_010407_170--Hb_001104_110 Hb_001268_120 Hb_001268_120 Hb_010407_170--Hb_001268_120 Hb_000905_170 Hb_000905_170 Hb_010407_170--Hb_000905_170 Hb_000009_330 Hb_000009_330 Hb_010407_170--Hb_000009_330 Hb_006538_080 Hb_006538_080 Hb_010407_170--Hb_006538_080 Hb_002631_040 Hb_002631_040 Hb_010407_170--Hb_002631_040 Hb_002874_130 Hb_002874_130 Hb_004785_040--Hb_002874_130 Hb_006717_070 Hb_006717_070 Hb_004785_040--Hb_006717_070 Hb_033772_070 Hb_033772_070 Hb_004785_040--Hb_033772_070 Hb_002259_060 Hb_002259_060 Hb_004785_040--Hb_002259_060 Hb_022250_150 Hb_022250_150 Hb_004785_040--Hb_022250_150 Hb_001799_190 Hb_001799_190 Hb_004785_040--Hb_001799_190 Hb_008790_020 Hb_008790_020 Hb_011861_120--Hb_008790_020 Hb_002236_050 Hb_002236_050 Hb_011861_120--Hb_002236_050 Hb_025336_020 Hb_025336_020 Hb_011861_120--Hb_025336_020 Hb_001726_110 Hb_001726_110 Hb_011861_120--Hb_001726_110 Hb_049436_010 Hb_049436_010 Hb_011861_120--Hb_049436_010 Hb_000094_370 Hb_000094_370 Hb_011861_120--Hb_000094_370 Hb_000028_420 Hb_000028_420 Hb_001541_040--Hb_000028_420 Hb_101733_030 Hb_101733_030 Hb_001541_040--Hb_101733_030 Hb_001541_040--Hb_010407_170 Hb_002400_350 Hb_002400_350 Hb_001541_040--Hb_002400_350 Hb_002346_010 Hb_002346_010 Hb_001541_040--Hb_002346_010 Hb_142321_010 Hb_142321_010 Hb_001541_040--Hb_142321_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.290743 0.282991 0.0921832 0.084622 0.13588 0.0305217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.118983 0.249587 0 0.412281 0.0646343

CAGE analysis