Hb_036790_130

Information

Type -
Description -
Location Contig36790: 105006-105484
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036790_130 0.0 - - -
2 Hb_000270_300 0.1259033412 - - -
3 Hb_000186_260 0.1577492425 transcription factor TF Family: PHD PREDICTED: protein polybromo-1-like [Jatropha curcas]
4 Hb_000556_100 0.1620729858 - - PREDICTED: uncharacterized protein LOC104784782 isoform X2 [Camelina sativa]
5 Hb_005214_060 0.1622073457 - - catalytic, putative [Ricinus communis]
6 Hb_005016_060 0.1649778878 - - PREDICTED: histidine--tRNA ligase, cytoplasmic [Jatropha curcas]
7 Hb_002411_180 0.1681776059 - - PREDICTED: THO complex subunit 1 isoform X1 [Jatropha curcas]
8 Hb_110482_010 0.1695535982 - - hypothetical protein JCGZ_16907 [Jatropha curcas]
9 Hb_003125_070 0.1726170653 - - PREDICTED: serine/threonine-protein kinase rio1-like [Jatropha curcas]
10 Hb_001369_350 0.1802902429 - - Cisplatin resistance-associated overexpressed protein, putative [Ricinus communis]
11 Hb_000365_160 0.1804732583 - - PREDICTED: serine/threonine-protein kinase At5g01020 [Jatropha curcas]
12 Hb_003299_070 0.1809073352 - - AMP deaminase [Theobroma cacao]
13 Hb_000120_620 0.1816696194 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1a isoform X1 [Jatropha curcas]
14 Hb_000343_230 0.1821433299 - - PREDICTED: peptidyl-prolyl cis-trans isomerase PASTICCINO1 isoform X1 [Jatropha curcas]
15 Hb_002687_190 0.1824846331 - - prolyl oligopeptidase [Cicer arietinum]
16 Hb_002918_060 0.1835857788 - - PREDICTED: glyoxysomal processing protease, glyoxysomal isoform X1 [Jatropha curcas]
17 Hb_005839_140 0.1836404947 - - -
18 Hb_000098_130 0.1840530246 - - PREDICTED: serine/threonine-protein kinase SRK2A [Jatropha curcas]
19 Hb_000703_210 0.1846730113 - - Inactive protein kinase [Gossypium arboreum]
20 Hb_003097_180 0.184793094 - - PREDICTED: crossover junction endonuclease MUS81 [Jatropha curcas]

Gene co-expression network

sample Hb_036790_130 Hb_036790_130 Hb_000270_300 Hb_000270_300 Hb_036790_130--Hb_000270_300 Hb_000186_260 Hb_000186_260 Hb_036790_130--Hb_000186_260 Hb_000556_100 Hb_000556_100 Hb_036790_130--Hb_000556_100 Hb_005214_060 Hb_005214_060 Hb_036790_130--Hb_005214_060 Hb_005016_060 Hb_005016_060 Hb_036790_130--Hb_005016_060 Hb_002411_180 Hb_002411_180 Hb_036790_130--Hb_002411_180 Hb_002918_060 Hb_002918_060 Hb_000270_300--Hb_002918_060 Hb_032202_120 Hb_032202_120 Hb_000270_300--Hb_032202_120 Hb_004586_280 Hb_004586_280 Hb_000270_300--Hb_004586_280 Hb_171900_070 Hb_171900_070 Hb_000270_300--Hb_171900_070 Hb_000317_250 Hb_000317_250 Hb_000270_300--Hb_000317_250 Hb_000504_160 Hb_000504_160 Hb_000186_260--Hb_000504_160 Hb_002659_060 Hb_002659_060 Hb_000186_260--Hb_002659_060 Hb_000331_160 Hb_000331_160 Hb_000186_260--Hb_000331_160 Hb_001473_080 Hb_001473_080 Hb_000186_260--Hb_001473_080 Hb_001396_290 Hb_001396_290 Hb_000186_260--Hb_001396_290 Hb_004017_040 Hb_004017_040 Hb_000186_260--Hb_004017_040 Hb_002045_150 Hb_002045_150 Hb_000556_100--Hb_002045_150 Hb_000556_100--Hb_000186_260 Hb_000556_100--Hb_002918_060 Hb_006658_040 Hb_006658_040 Hb_000556_100--Hb_006658_040 Hb_011609_050 Hb_011609_050 Hb_000556_100--Hb_011609_050 Hb_004976_020 Hb_004976_020 Hb_000556_100--Hb_004976_020 Hb_009913_050 Hb_009913_050 Hb_005214_060--Hb_009913_050 Hb_002942_080 Hb_002942_080 Hb_005214_060--Hb_002942_080 Hb_002675_060 Hb_002675_060 Hb_005214_060--Hb_002675_060 Hb_000213_070 Hb_000213_070 Hb_005214_060--Hb_000213_070 Hb_000331_190 Hb_000331_190 Hb_005214_060--Hb_000331_190 Hb_024990_010 Hb_024990_010 Hb_005214_060--Hb_024990_010 Hb_001178_150 Hb_001178_150 Hb_005016_060--Hb_001178_150 Hb_003299_070 Hb_003299_070 Hb_005016_060--Hb_003299_070 Hb_005892_030 Hb_005892_030 Hb_005016_060--Hb_005892_030 Hb_000796_190 Hb_000796_190 Hb_005016_060--Hb_000796_190 Hb_010695_020 Hb_010695_020 Hb_005016_060--Hb_010695_020 Hb_000594_020 Hb_000594_020 Hb_005016_060--Hb_000594_020 Hb_009838_130 Hb_009838_130 Hb_002411_180--Hb_009838_130 Hb_002411_180--Hb_001396_290 Hb_008518_050 Hb_008518_050 Hb_002411_180--Hb_008518_050 Hb_002411_180--Hb_009913_050 Hb_002411_180--Hb_005214_060 Hb_002048_090 Hb_002048_090 Hb_002411_180--Hb_002048_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.975379 0.870717 0.79654 0.255448 1.16137 1.63766
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.944629 0.247332 0 0.779027 0.22594

CAGE analysis