Hb_030131_020

Information

Type -
Description -
Location Contig30131: 7758-29079
Sequence    

Annotation

kegg
ID rcu:RCOM_1600900
description Carboxypeptidase B2 precursor, putative
nr
ID XP_002510664.1
description Carboxypeptidase B2 precursor, putative [Ricinus communis]
swissprot
ID Q70PR7
description Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2
trembl
ID B9R8M1
description Carboxypeptidase B2, putative OS=Ricinus communis GN=RCOM_1600900 PE=4 SV=1
Gene Ontology
ID GO:0004181
description carboxypeptidase b2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31728: 27877-28632 , PASA_asmbl_31729: 24601-29015
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_030131_020 0.0 - - Carboxypeptidase B2 precursor, putative [Ricinus communis]
2 Hb_004052_070 0.1078827386 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
3 Hb_000808_210 0.1100887186 - - hypothetical protein EUTSA_v10023481mg [Eutrema salsugineum]
4 Hb_000009_020 0.1128434468 - - ketol-acid reductoisomerase, chloroplast precursor, putative [Ricinus communis]
5 Hb_001624_040 0.1147789001 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Jatropha curcas]
6 Hb_029695_070 0.1174444777 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
7 Hb_001450_020 0.1213786513 - - PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Jatropha curcas]
8 Hb_001623_490 0.1214610695 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 isoform X2 [Jatropha curcas]
9 Hb_000302_190 0.1277641159 - - PREDICTED: uncharacterized protein At3g49140-like [Jatropha curcas]
10 Hb_006555_040 0.1286783922 - - PREDICTED: uncharacterized protein LOC105639405 [Jatropha curcas]
11 Hb_001279_090 0.1315792492 - - PREDICTED: uncharacterized protein LOC105633322 [Jatropha curcas]
12 Hb_003160_070 0.131944887 - - PREDICTED: VIN3-like protein 1 [Jatropha curcas]
13 Hb_002027_320 0.1322542352 - - PREDICTED: RNA-binding protein BRN1 [Jatropha curcas]
14 Hb_006618_070 0.1324402049 - - PREDICTED: uncharacterized protein LOC105645975 isoform X1 [Jatropha curcas]
15 Hb_000140_440 0.1324988642 - - PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Jatropha curcas]
16 Hb_001789_160 0.1332522731 - - PREDICTED: putative transporter arsB [Jatropha curcas]
17 Hb_004994_080 0.1341111162 - - PREDICTED: cell division protein FtsY homolog, chloroplastic isoform X1 [Jatropha curcas]
18 Hb_000211_040 0.1349306806 - - PREDICTED: uncharacterized protein LOC105629236 [Jatropha curcas]
19 Hb_001663_130 0.1350280702 - - acyl-CoA thioesterase, putative [Ricinus communis]
20 Hb_000035_210 0.1357371104 - - PREDICTED: BTB/POZ domain-containing protein NPY1 [Jatropha curcas]

Gene co-expression network

sample Hb_030131_020 Hb_030131_020 Hb_004052_070 Hb_004052_070 Hb_030131_020--Hb_004052_070 Hb_000808_210 Hb_000808_210 Hb_030131_020--Hb_000808_210 Hb_000009_020 Hb_000009_020 Hb_030131_020--Hb_000009_020 Hb_001624_040 Hb_001624_040 Hb_030131_020--Hb_001624_040 Hb_029695_070 Hb_029695_070 Hb_030131_020--Hb_029695_070 Hb_001450_020 Hb_001450_020 Hb_030131_020--Hb_001450_020 Hb_002498_170 Hb_002498_170 Hb_004052_070--Hb_002498_170 Hb_000035_210 Hb_000035_210 Hb_004052_070--Hb_000035_210 Hb_004907_090 Hb_004907_090 Hb_004052_070--Hb_004907_090 Hb_004013_030 Hb_004013_030 Hb_004052_070--Hb_004013_030 Hb_003160_070 Hb_003160_070 Hb_004052_070--Hb_003160_070 Hb_001279_090 Hb_001279_090 Hb_000808_210--Hb_001279_090 Hb_000302_190 Hb_000302_190 Hb_000808_210--Hb_000302_190 Hb_000808_210--Hb_001450_020 Hb_070624_010 Hb_070624_010 Hb_000808_210--Hb_070624_010 Hb_000224_220 Hb_000224_220 Hb_000808_210--Hb_000224_220 Hb_001953_100 Hb_001953_100 Hb_000009_020--Hb_001953_100 Hb_000056_310 Hb_000056_310 Hb_000009_020--Hb_000056_310 Hb_000009_020--Hb_000035_210 Hb_003683_030 Hb_003683_030 Hb_000009_020--Hb_003683_030 Hb_004837_210 Hb_004837_210 Hb_000009_020--Hb_004837_210 Hb_011609_010 Hb_011609_010 Hb_001624_040--Hb_011609_010 Hb_002301_210 Hb_002301_210 Hb_001624_040--Hb_002301_210 Hb_000453_230 Hb_000453_230 Hb_001624_040--Hb_000453_230 Hb_004116_160 Hb_004116_160 Hb_001624_040--Hb_004116_160 Hb_000418_090 Hb_000418_090 Hb_001624_040--Hb_000418_090 Hb_000803_090 Hb_000803_090 Hb_001624_040--Hb_000803_090 Hb_002044_020 Hb_002044_020 Hb_029695_070--Hb_002044_020 Hb_029695_070--Hb_070624_010 Hb_000265_070 Hb_000265_070 Hb_029695_070--Hb_000265_070 Hb_000645_180 Hb_000645_180 Hb_029695_070--Hb_000645_180 Hb_029695_070--Hb_003160_070 Hb_005665_090 Hb_005665_090 Hb_029695_070--Hb_005665_090 Hb_001450_020--Hb_004013_030 Hb_006588_160 Hb_006588_160 Hb_001450_020--Hb_006588_160 Hb_000154_050 Hb_000154_050 Hb_001450_020--Hb_000154_050 Hb_000497_190 Hb_000497_190 Hb_001450_020--Hb_000497_190 Hb_004032_370 Hb_004032_370 Hb_001450_020--Hb_004032_370 Hb_001450_020--Hb_001279_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.846 1.5119 8.98059 2.25589 1.96454 1.61117
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.635185 0.719793 0.747289 2.18329 3.86899

CAGE analysis