Hb_012799_190

Information

Type -
Description -
Location Contig12799: 105470-106069
Sequence    

Annotation

kegg
ID rcu:RCOM_1496610
description 3-hexulose-6-phosphate isomerase, putative
nr
ID XP_012090283.1
description PREDICTED: uncharacterized protein LOC105648490 [Jatropha curcas]
swissprot
ID P42404
description 3-hexulose-6-phosphate isomerase OS=Bacillus subtilis (strain 168) GN=hxlB PE=1 SV=1
trembl
ID A0A067JHP5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26134 PE=4 SV=1
Gene Ontology
ID GO:0016853
description sugar isomerase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08657: 104248-104575 , PASA_asmbl_08658: 105385-106234
cDNA
(Sanger)
(ID:Location)		 018_J02.ab1: 105385-106106 , 025_A21.ab1: 105452-106229 , 046_L18.ab1: 105452-106231 , 052_B04.ab1: 105441-106066 , 052_H15.ab1: 105385-106067

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012799_190 0.0 - - PREDICTED: uncharacterized protein LOC105648490 [Jatropha curcas]
2 Hb_004242_170 0.1062473701 - - calcium/calmodulin-regulated receptor-like kinase [Manihot esculenta]
3 Hb_000834_080 0.1072589311 - - PREDICTED: uncharacterized protein LOC105637718 [Jatropha curcas]
4 Hb_001053_020 0.1126265698 - - carotenoid cleavage dioxygenase 1 [Manihot esculenta]
5 Hb_000336_200 0.1140128183 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
6 Hb_000976_130 0.1163894023 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
7 Hb_000762_110 0.1167644693 - - PREDICTED: protease Do-like 1, chloroplastic [Jatropha curcas]
8 Hb_008616_040 0.1176811102 - - PREDICTED: RNA-binding protein CP33, chloroplastic [Jatropha curcas]
9 Hb_003207_030 0.1178465943 - - hypothetical protein VITISV_027754 [Vitis vinifera]
10 Hb_001269_500 0.1183752695 - - PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic-like isoform X2 [Populus euphratica]
11 Hb_006916_030 0.1186079587 - - PREDICTED: uncharacterized protein LOC105646760 [Jatropha curcas]
12 Hb_001250_020 0.1196741435 - - PREDICTED: CRS2-associated factor 2, chloroplastic [Jatropha curcas]
13 Hb_005914_210 0.1214442064 - - PREDICTED: uncharacterized protein LOC105638411 [Jatropha curcas]
14 Hb_071079_020 0.1219556298 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
15 Hb_000140_060 0.1220406056 - - 50S ribosomal protein L5, putative [Ricinus communis]
16 Hb_000665_270 0.1221429671 - - PREDICTED: adenine phosphoribosyltransferase 5 [Jatropha curcas]
17 Hb_002675_080 0.1224783006 - - PREDICTED: uncharacterized protein LOC105634950 [Jatropha curcas]
18 Hb_000099_170 0.1237692487 - - PREDICTED: uncharacterized protein LOC105645733 [Jatropha curcas]
19 Hb_002374_450 0.1272062523 - - PREDICTED: chlorophyllide a oxygenase, chloroplastic [Jatropha curcas]
20 Hb_000042_050 0.1318044694 - - PREDICTED: uncharacterized protein LOC105632791 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_012799_190 Hb_012799_190 Hb_004242_170 Hb_004242_170 Hb_012799_190--Hb_004242_170 Hb_000834_080 Hb_000834_080 Hb_012799_190--Hb_000834_080 Hb_001053_020 Hb_001053_020 Hb_012799_190--Hb_001053_020 Hb_000336_200 Hb_000336_200 Hb_012799_190--Hb_000336_200 Hb_000976_130 Hb_000976_130 Hb_012799_190--Hb_000976_130 Hb_000762_110 Hb_000762_110 Hb_012799_190--Hb_000762_110 Hb_000441_050 Hb_000441_050 Hb_004242_170--Hb_000441_050 Hb_004242_170--Hb_001053_020 Hb_000108_150 Hb_000108_150 Hb_004242_170--Hb_000108_150 Hb_005977_060 Hb_005977_060 Hb_004242_170--Hb_005977_060 Hb_001348_090 Hb_001348_090 Hb_004242_170--Hb_001348_090 Hb_009692_040 Hb_009692_040 Hb_004242_170--Hb_009692_040 Hb_011053_030 Hb_011053_030 Hb_000834_080--Hb_011053_030 Hb_126917_010 Hb_126917_010 Hb_000834_080--Hb_126917_010 Hb_001628_120 Hb_001628_120 Hb_000834_080--Hb_001628_120 Hb_000975_050 Hb_000975_050 Hb_000834_080--Hb_000975_050 Hb_000175_050 Hb_000175_050 Hb_000834_080--Hb_000175_050 Hb_000042_050 Hb_000042_050 Hb_001053_020--Hb_000042_050 Hb_001053_020--Hb_000441_050 Hb_001053_020--Hb_000976_130 Hb_001252_030 Hb_001252_030 Hb_001053_020--Hb_001252_030 Hb_001053_020--Hb_009692_040 Hb_000665_270 Hb_000665_270 Hb_000336_200--Hb_000665_270 Hb_001269_500 Hb_001269_500 Hb_000336_200--Hb_001269_500 Hb_001649_030 Hb_001649_030 Hb_000336_200--Hb_001649_030 Hb_000465_440 Hb_000465_440 Hb_000336_200--Hb_000465_440 Hb_000358_040 Hb_000358_040 Hb_000336_200--Hb_000358_040 Hb_009288_040 Hb_009288_040 Hb_000336_200--Hb_009288_040 Hb_008616_040 Hb_008616_040 Hb_000976_130--Hb_008616_040 Hb_000005_100 Hb_000005_100 Hb_000976_130--Hb_000005_100 Hb_001250_020 Hb_001250_020 Hb_000976_130--Hb_001250_020 Hb_000976_130--Hb_004242_170 Hb_005914_210 Hb_005914_210 Hb_000762_110--Hb_005914_210 Hb_000376_210 Hb_000376_210 Hb_000762_110--Hb_000376_210 Hb_000762_110--Hb_001250_020 Hb_002928_030 Hb_002928_030 Hb_000762_110--Hb_002928_030 Hb_000120_860 Hb_000120_860 Hb_000762_110--Hb_000120_860 Hb_000579_040 Hb_000579_040 Hb_000762_110--Hb_000579_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.36169 28.526 44.7093 62.3022 12.909 13.067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.07805 12.6179 6.38458 12.855 109.193

CAGE analysis