Hb_012528_020

Information

Type -
Description -
Location Contig12528: 20068-23646
Sequence    

Annotation

kegg
ID rcu:RCOM_0339150
description Receptor protein kinase CLAVATA1 precursor, putative (EC:2.7.11.25 1.3.1.74)
nr
ID XP_012079493.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Jatropha curcas]
swissprot
ID C0LGX3
description LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1
trembl
ID A0A067K7C4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12602 PE=3 SV=1
Gene Ontology
ID GO:0005622
description lrr receptor-like serine threonine-protein kinase hsl2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_07774: 20130-23437 , PASA_asmbl_07776: 21775-22412
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012528_020 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Jatropha curcas]
2 Hb_007123_050 0.1077270541 - - Vitellogenic carboxypeptidase, putative [Ricinus communis]
3 Hb_001059_130 0.1087118958 - - PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1 [Jatropha curcas]
4 Hb_002475_040 0.1103032106 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial [Jatropha curcas]
5 Hb_005323_010 0.1125029452 - - PREDICTED: uncharacterized protein LOC105642810 [Jatropha curcas]
6 Hb_158092_080 0.115917816 - - hypothetical protein JCGZ_23092 [Jatropha curcas]
7 Hb_001989_050 0.1164194409 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 5 [Jatropha curcas]
8 Hb_000284_230 0.1173726824 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
9 Hb_004064_050 0.1183679561 - - Structural maintenance of chromosome, putative [Ricinus communis]
10 Hb_003124_160 0.1237430844 - - dynamin, putative [Ricinus communis]
11 Hb_006508_030 0.1240578843 - - PREDICTED: CDPK-related kinase 1-like [Jatropha curcas]
12 Hb_000243_130 0.1242591205 - - hypothetical protein M569_10795, partial [Genlisea aurea]
13 Hb_001935_160 0.1246554927 - - PREDICTED: F-box protein At5g51370-like [Jatropha curcas]
14 Hb_001194_020 0.1253969327 - - microtubule associated protein xmap215, putative [Ricinus communis]
15 Hb_073973_150 0.1263799103 - - PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
16 Hb_002092_070 0.126442821 - - PREDICTED: aluminum-activated malate transporter 9-like [Jatropha curcas]
17 Hb_002814_060 0.1268644615 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
18 Hb_156850_090 0.1271556556 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
19 Hb_011920_020 0.1275439633 - - PREDICTED: uncharacterized protein LOC105645397 [Jatropha curcas]
20 Hb_001008_050 0.1275510101 - - PREDICTED: WD repeat-containing protein 43 [Jatropha curcas]

Gene co-expression network

sample Hb_012528_020 Hb_012528_020 Hb_007123_050 Hb_007123_050 Hb_012528_020--Hb_007123_050 Hb_001059_130 Hb_001059_130 Hb_012528_020--Hb_001059_130 Hb_002475_040 Hb_002475_040 Hb_012528_020--Hb_002475_040 Hb_005323_010 Hb_005323_010 Hb_012528_020--Hb_005323_010 Hb_158092_080 Hb_158092_080 Hb_012528_020--Hb_158092_080 Hb_001989_050 Hb_001989_050 Hb_012528_020--Hb_001989_050 Hb_007123_050--Hb_158092_080 Hb_004064_050 Hb_004064_050 Hb_007123_050--Hb_004064_050 Hb_000243_130 Hb_000243_130 Hb_007123_050--Hb_000243_130 Hb_000608_230 Hb_000608_230 Hb_007123_050--Hb_000608_230 Hb_044486_040 Hb_044486_040 Hb_007123_050--Hb_044486_040 Hb_003913_110 Hb_003913_110 Hb_007123_050--Hb_003913_110 Hb_000284_230 Hb_000284_230 Hb_001059_130--Hb_000284_230 Hb_000588_080 Hb_000588_080 Hb_001059_130--Hb_000588_080 Hb_001194_020 Hb_001194_020 Hb_001059_130--Hb_001194_020 Hb_000358_100 Hb_000358_100 Hb_001059_130--Hb_000358_100 Hb_000020_160 Hb_000020_160 Hb_001059_130--Hb_000020_160 Hb_006355_020 Hb_006355_020 Hb_001059_130--Hb_006355_020 Hb_002475_040--Hb_000284_230 Hb_002475_040--Hb_004064_050 Hb_002475_040--Hb_158092_080 Hb_003124_160 Hb_003124_160 Hb_002475_040--Hb_003124_160 Hb_012055_110 Hb_012055_110 Hb_002475_040--Hb_012055_110 Hb_001935_160 Hb_001935_160 Hb_002475_040--Hb_001935_160 Hb_001153_050 Hb_001153_050 Hb_005323_010--Hb_001153_050 Hb_006573_160 Hb_006573_160 Hb_005323_010--Hb_006573_160 Hb_000878_160 Hb_000878_160 Hb_005323_010--Hb_000878_160 Hb_073973_150 Hb_073973_150 Hb_005323_010--Hb_073973_150 Hb_003398_100 Hb_003398_100 Hb_005323_010--Hb_003398_100 Hb_033554_020 Hb_033554_020 Hb_005323_010--Hb_033554_020 Hb_158092_080--Hb_004064_050 Hb_158092_080--Hb_000284_230 Hb_007894_160 Hb_007894_160 Hb_158092_080--Hb_007894_160 Hb_000608_300 Hb_000608_300 Hb_158092_080--Hb_000608_300 Hb_006573_170 Hb_006573_170 Hb_001989_050--Hb_006573_170 Hb_000176_130 Hb_000176_130 Hb_001989_050--Hb_000176_130 Hb_001492_040 Hb_001492_040 Hb_001989_050--Hb_001492_040 Hb_000086_690 Hb_000086_690 Hb_001989_050--Hb_000086_690 Hb_005214_150 Hb_005214_150 Hb_001989_050--Hb_005214_150 Hb_000836_020 Hb_000836_020 Hb_001989_050--Hb_000836_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.5776 25.057 15.9253 19.2466 21.2697 15.2789
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.19964 3.51342 3.19974 22.2282 26.1356

CAGE analysis