Hb_011909_070

Information

Type -
Description -
Location Contig11909: 72585-76307
Sequence    

Annotation

kegg
ID tcc:TCM_031288
description Adenine nucleotide alpha hydrolases-like superfamily protein isoform 1
nr
ID XP_012070680.1
description PREDICTED: uncharacterized protein LOC105632834 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KS57
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00724 PE=4 SV=1
Gene Ontology
ID GO:0006950
description adenine nucleotide alpha hydrolases-like superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05625: 16956-76135 , PASA_asmbl_05626: 16956-76135
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011909_070 0.0 - - PREDICTED: uncharacterized protein LOC105632834 [Jatropha curcas]
2 Hb_120803_010 0.1017212964 - - PREDICTED: protein kinase and PP2C-like domain-containing protein [Malus domestica]
3 Hb_001047_200 0.12385726 - - PREDICTED: pre-mRNA-splicing factor 18 [Eucalyptus grandis]
4 Hb_001645_140 0.1275542274 - - PREDICTED: AT-hook motif nuclear-localized protein 13-like [Jatropha curcas]
5 Hb_000236_470 0.1308129185 - - PREDICTED: pentatricopeptide repeat-containing protein At5g55840 [Jatropha curcas]
6 Hb_004032_040 0.1345002863 - - unknown [Medicago truncatula]
7 Hb_000577_030 0.1347518939 - - Ubiquitin carboxyl-terminal hydrolase 12 -like protein [Gossypium arboreum]
8 Hb_000823_030 0.1358976885 - - PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Jatropha curcas]
9 Hb_000556_170 0.1368236557 - - PREDICTED: uncharacterized protein LOC105643102 isoform X2 [Jatropha curcas]
10 Hb_001301_170 0.139337012 - - PREDICTED: purple acid phosphatase 18 [Jatropha curcas]
11 Hb_012114_050 0.1394794906 - - PREDICTED: uncharacterized protein LOC105645815 isoform X1 [Jatropha curcas]
12 Hb_000094_320 0.1401633123 - - hypothetical protein JCGZ_04407 [Jatropha curcas]
13 Hb_012146_050 0.1430733102 - - PREDICTED: protein translocase subunit SECA2, chloroplastic [Jatropha curcas]
14 Hb_003581_250 0.1432872011 - - PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Jatropha curcas]
15 Hb_000304_050 0.144692409 transcription factor TF Family: GRAS PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
16 Hb_088144_020 0.145030313 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 6-like isoform X1 [Jatropha curcas]
17 Hb_007426_060 0.1451713747 desease resistance Gene Name: NB-ARC unnamed protein product [Coffea canephora]
18 Hb_003849_140 0.1461331302 - - PREDICTED: uncharacterized protein LOC105644697 [Jatropha curcas]
19 Hb_001021_200 0.1463628496 desease resistance Gene Name: AAA PREDICTED: peroxisome biogenesis protein 6 [Jatropha curcas]
20 Hb_000010_360 0.1463920659 - - PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Jatropha curcas]

Gene co-expression network

sample Hb_011909_070 Hb_011909_070 Hb_120803_010 Hb_120803_010 Hb_011909_070--Hb_120803_010 Hb_001047_200 Hb_001047_200 Hb_011909_070--Hb_001047_200 Hb_001645_140 Hb_001645_140 Hb_011909_070--Hb_001645_140 Hb_000236_470 Hb_000236_470 Hb_011909_070--Hb_000236_470 Hb_004032_040 Hb_004032_040 Hb_011909_070--Hb_004032_040 Hb_000577_030 Hb_000577_030 Hb_011909_070--Hb_000577_030 Hb_120803_010--Hb_000236_470 Hb_000556_170 Hb_000556_170 Hb_120803_010--Hb_000556_170 Hb_120803_010--Hb_001047_200 Hb_001191_120 Hb_001191_120 Hb_120803_010--Hb_001191_120 Hb_000640_310 Hb_000640_310 Hb_120803_010--Hb_000640_310 Hb_001277_020 Hb_001277_020 Hb_120803_010--Hb_001277_020 Hb_001047_200--Hb_000577_030 Hb_000823_030 Hb_000823_030 Hb_001047_200--Hb_000823_030 Hb_001047_200--Hb_000236_470 Hb_000184_150 Hb_000184_150 Hb_001047_200--Hb_000184_150 Hb_001021_200 Hb_001021_200 Hb_001047_200--Hb_001021_200 Hb_005542_050 Hb_005542_050 Hb_001047_200--Hb_005542_050 Hb_000363_400 Hb_000363_400 Hb_001645_140--Hb_000363_400 Hb_001301_170 Hb_001301_170 Hb_001645_140--Hb_001301_170 Hb_000352_260 Hb_000352_260 Hb_001645_140--Hb_000352_260 Hb_000012_260 Hb_000012_260 Hb_001645_140--Hb_000012_260 Hb_005288_010 Hb_005288_010 Hb_001645_140--Hb_005288_010 Hb_000236_470--Hb_001277_020 Hb_000236_470--Hb_000640_310 Hb_002701_150 Hb_002701_150 Hb_000236_470--Hb_002701_150 Hb_000236_470--Hb_000556_170 Hb_000703_200 Hb_000703_200 Hb_004032_040--Hb_000703_200 Hb_012368_100 Hb_012368_100 Hb_004032_040--Hb_012368_100 Hb_000094_320 Hb_000094_320 Hb_004032_040--Hb_000094_320 Hb_120470_010 Hb_120470_010 Hb_004032_040--Hb_120470_010 Hb_000117_070 Hb_000117_070 Hb_004032_040--Hb_000117_070 Hb_000574_420 Hb_000574_420 Hb_004032_040--Hb_000574_420 Hb_000577_030--Hb_001021_200 Hb_000577_030--Hb_000184_150 Hb_000917_160 Hb_000917_160 Hb_000577_030--Hb_000917_160 Hb_032920_130 Hb_032920_130 Hb_000577_030--Hb_032920_130 Hb_118840_050 Hb_118840_050 Hb_000577_030--Hb_118840_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.566 43.6027 30.3302 4.01927 28.6383 26.3361
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.81928 10.7185 19.247 37.661 15.9059

CAGE analysis