Hb_001301_170

Information

Type -
Description -
Location Contig1301: 125431-130528
Sequence    

Annotation

kegg
ID tcc:TCM_030941
description Purple acid phosphatase 18
nr
ID XP_012070798.1
description PREDICTED: purple acid phosphatase 18 [Jatropha curcas]
swissprot
ID Q9LJU7
description Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1
trembl
ID A0A067L4U3
description Purple acid phosphatase OS=Jatropha curcas GN=JCGZ_00866 PE=3 SV=1
Gene Ontology
ID GO:0003993
description purple acid phosphatase 18

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09016: 125455-130499
cDNA
(Sanger)
(ID:Location)		 003_D03.ab1: 128903-130410 , 006_I01.ab1: 128946-130410

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001301_170 0.0 - - PREDICTED: purple acid phosphatase 18 [Jatropha curcas]
2 Hb_010053_030 0.079466841 - - PREDICTED: tRNA (cytosine(34)-C(5))-methyltransferase [Jatropha curcas]
3 Hb_000664_070 0.081950324 - - PREDICTED: protein cereblon [Jatropha curcas]
4 Hb_104061_020 0.0845330862 - - PREDICTED: UV-stimulated scaffold protein A homolog [Jatropha curcas]
5 Hb_000823_030 0.0854744394 - - PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Jatropha curcas]
6 Hb_008147_040 0.0867849201 - - PREDICTED: protein FLX-like 2 [Jatropha curcas]
7 Hb_001318_020 0.087900741 - - HAT dimerization domain-containing protein isoform 2 [Theobroma cacao]
8 Hb_004627_060 0.0906839374 - - PREDICTED: ethylene receptor isoform X2 [Jatropha curcas]
9 Hb_005048_100 0.090821146 - - secretory carrier membrane protein, putative [Ricinus communis]
10 Hb_000307_210 0.091653542 - - Transportin 1 isoform 1 [Theobroma cacao]
11 Hb_001047_200 0.0920516121 - - PREDICTED: pre-mRNA-splicing factor 18 [Eucalyptus grandis]
12 Hb_004884_150 0.0926943824 - - PREDICTED: ubiquitin-activating enzyme E1 1-like [Jatropha curcas]
13 Hb_001277_020 0.0936052961 - - PREDICTED: armadillo repeat-containing protein LFR [Jatropha curcas]
14 Hb_000352_260 0.0944261058 - - PREDICTED: WD repeat-containing protein LWD1 [Jatropha curcas]
15 Hb_000556_170 0.0962185278 - - PREDICTED: uncharacterized protein LOC105643102 isoform X2 [Jatropha curcas]
16 Hb_023226_080 0.0965304646 transcription factor TF Family: C3H PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1 [Jatropha curcas]
17 Hb_000345_140 0.0968506684 - - PREDICTED: autophagy-related protein 18a-like [Jatropha curcas]
18 Hb_000010_360 0.097048359 - - PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY [Jatropha curcas]
19 Hb_000577_030 0.097481441 - - Ubiquitin carboxyl-terminal hydrolase 12 -like protein [Gossypium arboreum]
20 Hb_002005_090 0.0975209741 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001301_170 Hb_001301_170 Hb_010053_030 Hb_010053_030 Hb_001301_170--Hb_010053_030 Hb_000664_070 Hb_000664_070 Hb_001301_170--Hb_000664_070 Hb_104061_020 Hb_104061_020 Hb_001301_170--Hb_104061_020 Hb_000823_030 Hb_000823_030 Hb_001301_170--Hb_000823_030 Hb_008147_040 Hb_008147_040 Hb_001301_170--Hb_008147_040 Hb_001318_020 Hb_001318_020 Hb_001301_170--Hb_001318_020 Hb_000923_080 Hb_000923_080 Hb_010053_030--Hb_000923_080 Hb_000505_020 Hb_000505_020 Hb_010053_030--Hb_000505_020 Hb_010053_030--Hb_104061_020 Hb_001235_140 Hb_001235_140 Hb_010053_030--Hb_001235_140 Hb_000648_100 Hb_000648_100 Hb_010053_030--Hb_000648_100 Hb_004096_070 Hb_004096_070 Hb_010053_030--Hb_004096_070 Hb_000594_040 Hb_000594_040 Hb_000664_070--Hb_000594_040 Hb_000664_070--Hb_008147_040 Hb_000771_180 Hb_000771_180 Hb_000664_070--Hb_000771_180 Hb_000640_310 Hb_000640_310 Hb_000664_070--Hb_000640_310 Hb_002783_310 Hb_002783_310 Hb_000664_070--Hb_002783_310 Hb_000160_350 Hb_000160_350 Hb_000664_070--Hb_000160_350 Hb_002107_070 Hb_002107_070 Hb_104061_020--Hb_002107_070 Hb_000579_230 Hb_000579_230 Hb_104061_020--Hb_000579_230 Hb_002329_040 Hb_002329_040 Hb_104061_020--Hb_002329_040 Hb_000740_100 Hb_000740_100 Hb_104061_020--Hb_000740_100 Hb_009175_020 Hb_009175_020 Hb_104061_020--Hb_009175_020 Hb_001047_200 Hb_001047_200 Hb_000823_030--Hb_001047_200 Hb_003142_040 Hb_003142_040 Hb_000823_030--Hb_003142_040 Hb_088144_020 Hb_088144_020 Hb_000823_030--Hb_088144_020 Hb_007426_060 Hb_007426_060 Hb_000823_030--Hb_007426_060 Hb_000184_150 Hb_000184_150 Hb_000823_030--Hb_000184_150 Hb_001171_030 Hb_001171_030 Hb_000823_030--Hb_001171_030 Hb_001277_020 Hb_001277_020 Hb_008147_040--Hb_001277_020 Hb_154114_010 Hb_154114_010 Hb_008147_040--Hb_154114_010 Hb_000556_170 Hb_000556_170 Hb_008147_040--Hb_000556_170 Hb_008147_040--Hb_000640_310 Hb_008147_040--Hb_000594_040 Hb_009615_170 Hb_009615_170 Hb_001318_020--Hb_009615_170 Hb_006355_090 Hb_006355_090 Hb_001318_020--Hb_006355_090 Hb_140049_080 Hb_140049_080 Hb_001318_020--Hb_140049_080 Hb_001377_160 Hb_001377_160 Hb_001318_020--Hb_001377_160 Hb_000130_020 Hb_000130_020 Hb_001318_020--Hb_000130_020 Hb_061878_010 Hb_061878_010 Hb_001318_020--Hb_061878_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
33.944 48.9856 30.1944 21.9862 52.5056 30.9795
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.3707 16.2529 25.8023 50.2409 17.5143

CAGE analysis