Hb_011224_090

Information

Type -
Description -
Location Contig11224: 43439-46419
Sequence    

Annotation

kegg
ID rcu:RCOM_0523320
description ATP-binding cassette transporter, putative (EC:3.6.3.29)
nr
ID XP_012071074.1
description PREDICTED: ABC transporter G family member 26 [Jatropha curcas]
swissprot
ID Q9LK50
description ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=2
trembl
ID A0A067L5F1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01076 PE=4 SV=1
Gene Ontology
ID GO:0005886
description abc transporter g family member 26

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011224_090 0.0 - - PREDICTED: ABC transporter G family member 26 [Jatropha curcas]
2 Hb_000668_120 0.1402945134 - - hypothetical protein JCGZ_11991 [Jatropha curcas]
3 Hb_001318_160 0.2119144237 - - Polygalacturonase precursor, putative [Ricinus communis]
4 Hb_000261_340 0.2204291835 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
5 Hb_002450_150 0.2266566092 - - ATP binding protein, putative [Ricinus communis]
6 Hb_007879_010 0.2329113846 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
7 Hb_000960_120 0.2362798482 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
8 Hb_002811_210 0.2400703618 - - PREDICTED: serine/threonine-protein kinase Nek1 isoform X1 [Jatropha curcas]
9 Hb_000574_520 0.247944094 - - PREDICTED: uncharacterized protein LOC105634842 isoform X1 [Jatropha curcas]
10 Hb_013344_010 0.2509722657 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 [Jatropha curcas]
11 Hb_002486_090 0.2523089547 - - hypothetical protein POPTR_0005s06910g [Populus trichocarpa]
12 Hb_003780_040 0.2543868 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
13 Hb_028487_120 0.2558762911 - - PREDICTED: HMG-Y-related protein B-like [Jatropha curcas]
14 Hb_000896_130 0.2567605043 transcription factor TF Family: CPP cysteine-rich polycomb-like family protein [Populus trichocarpa]
15 Hb_007894_100 0.2570223085 - - PREDICTED: uncharacterized protein LOC105632952 [Jatropha curcas]
16 Hb_002307_040 0.2572385722 - - DNA binding protein, putative [Ricinus communis]
17 Hb_008406_100 0.2589215675 - - PREDICTED: protein TPX2 isoform X2 [Jatropha curcas]
18 Hb_007416_380 0.2593349858 - - PREDICTED: fasciclin-like arabinogalactan protein 3 [Jatropha curcas]
19 Hb_004449_160 0.2598182079 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_000069_390 0.2599551455 - - PREDICTED: probable F-box protein At3g61730 [Jatropha curcas]

Gene co-expression network

sample Hb_011224_090 Hb_011224_090 Hb_000668_120 Hb_000668_120 Hb_011224_090--Hb_000668_120 Hb_001318_160 Hb_001318_160 Hb_011224_090--Hb_001318_160 Hb_000261_340 Hb_000261_340 Hb_011224_090--Hb_000261_340 Hb_002450_150 Hb_002450_150 Hb_011224_090--Hb_002450_150 Hb_007879_010 Hb_007879_010 Hb_011224_090--Hb_007879_010 Hb_000960_120 Hb_000960_120 Hb_011224_090--Hb_000960_120 Hb_000668_120--Hb_007879_010 Hb_003780_040 Hb_003780_040 Hb_000668_120--Hb_003780_040 Hb_183612_020 Hb_183612_020 Hb_000668_120--Hb_183612_020 Hb_009164_020 Hb_009164_020 Hb_000668_120--Hb_009164_020 Hb_059295_010 Hb_059295_010 Hb_000668_120--Hb_059295_010 Hb_002362_010 Hb_002362_010 Hb_001318_160--Hb_002362_010 Hb_144649_010 Hb_144649_010 Hb_001318_160--Hb_144649_010 Hb_184109_010 Hb_184109_010 Hb_001318_160--Hb_184109_010 Hb_000866_350 Hb_000866_350 Hb_001318_160--Hb_000866_350 Hb_000896_130 Hb_000896_130 Hb_001318_160--Hb_000896_130 Hb_000756_030 Hb_000756_030 Hb_001318_160--Hb_000756_030 Hb_000397_170 Hb_000397_170 Hb_000261_340--Hb_000397_170 Hb_003226_060 Hb_003226_060 Hb_000261_340--Hb_003226_060 Hb_000574_180 Hb_000574_180 Hb_000261_340--Hb_000574_180 Hb_000256_170 Hb_000256_170 Hb_000261_340--Hb_000256_170 Hb_005599_010 Hb_005599_010 Hb_000261_340--Hb_005599_010 Hb_007894_100 Hb_007894_100 Hb_000261_340--Hb_007894_100 Hb_000574_520 Hb_000574_520 Hb_002450_150--Hb_000574_520 Hb_002450_150--Hb_183612_020 Hb_007416_380 Hb_007416_380 Hb_002450_150--Hb_007416_380 Hb_000069_390 Hb_000069_390 Hb_002450_150--Hb_000069_390 Hb_141199_010 Hb_141199_010 Hb_002450_150--Hb_141199_010 Hb_000000_040 Hb_000000_040 Hb_002450_150--Hb_000000_040 Hb_011161_030 Hb_011161_030 Hb_007879_010--Hb_011161_030 Hb_000172_490 Hb_000172_490 Hb_007879_010--Hb_000172_490 Hb_005016_180 Hb_005016_180 Hb_007879_010--Hb_005016_180 Hb_001138_030 Hb_001138_030 Hb_007879_010--Hb_001138_030 Hb_013344_010 Hb_013344_010 Hb_000960_120--Hb_013344_010 Hb_001761_010 Hb_001761_010 Hb_000960_120--Hb_001761_010 Hb_022092_040 Hb_022092_040 Hb_000960_120--Hb_022092_040 Hb_002811_210 Hb_002811_210 Hb_000960_120--Hb_002811_210 Hb_006060_010 Hb_006060_010 Hb_000960_120--Hb_006060_010 Hb_008406_100 Hb_008406_100 Hb_000960_120--Hb_008406_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0088953 0.120872 0.0253831 0.00840166 0.0157015
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00637647 0

CAGE analysis