Hb_000866_350

Information

Type -
Description -
Location Contig866: 243213-243786
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000866_350 0.0 - - -
2 Hb_184109_010 0.088152433 - - PREDICTED: transcription factor WER-like [Jatropha curcas]
3 Hb_168241_010 0.1726484566 - - hypothetical protein POPTR_0013s14620g, partial [Populus trichocarpa]
4 Hb_007017_050 0.1759105423 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001318_160 0.1762244988 - - Polygalacturonase precursor, putative [Ricinus communis]
6 Hb_011063_040 0.1829204336 - - PREDICTED: uncharacterized protein LOC100853799 [Vitis vinifera]
7 Hb_000896_130 0.2143707421 transcription factor TF Family: CPP cysteine-rich polycomb-like family protein [Populus trichocarpa]
8 Hb_012143_010 0.2245949646 - - PREDICTED: serine/threonine-protein kinase At5g01020 [Vitis vinifera]
9 Hb_001132_020 0.2246113091 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
10 Hb_046615_050 0.2246205355 - - PREDICTED: probable terpene synthase 13 [Jatropha curcas]
11 Hb_000691_040 0.2246364392 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
12 Hb_001268_270 0.2246453125 - - protein binding protein, putative [Ricinus communis]
13 Hb_000381_060 0.2246614579 - - -
14 Hb_001019_110 0.2246721204 - - PREDICTED: cytochrome P450 734A1 [Jatropha curcas]
15 Hb_004126_020 0.2247464261 - - PREDICTED: uncharacterized protein LOC105649549 [Jatropha curcas]
16 Hb_000221_010 0.2247659542 - - polyprotein [Oryza australiensis]
17 Hb_002817_020 0.2249629206 - - -
18 Hb_007552_030 0.2249674648 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21064 [Jatropha curcas]
19 Hb_002391_280 0.2249837916 - - PREDICTED: ammonium transporter 3 member 1-like [Jatropha curcas]
20 Hb_000008_100 0.2250482022 - - Cyclic nucleotide-gated channel 15 [Theobroma cacao]

Gene co-expression network

sample Hb_000866_350 Hb_000866_350 Hb_184109_010 Hb_184109_010 Hb_000866_350--Hb_184109_010 Hb_168241_010 Hb_168241_010 Hb_000866_350--Hb_168241_010 Hb_007017_050 Hb_007017_050 Hb_000866_350--Hb_007017_050 Hb_001318_160 Hb_001318_160 Hb_000866_350--Hb_001318_160 Hb_011063_040 Hb_011063_040 Hb_000866_350--Hb_011063_040 Hb_000896_130 Hb_000896_130 Hb_000866_350--Hb_000896_130 Hb_184109_010--Hb_168241_010 Hb_184109_010--Hb_007017_050 Hb_184109_010--Hb_011063_040 Hb_184109_010--Hb_001318_160 Hb_004994_270 Hb_004994_270 Hb_184109_010--Hb_004994_270 Hb_168241_010--Hb_007017_050 Hb_071116_010 Hb_071116_010 Hb_168241_010--Hb_071116_010 Hb_000556_030 Hb_000556_030 Hb_168241_010--Hb_000556_030 Hb_000053_140 Hb_000053_140 Hb_168241_010--Hb_000053_140 Hb_004375_090 Hb_004375_090 Hb_007017_050--Hb_004375_090 Hb_001104_030 Hb_001104_030 Hb_007017_050--Hb_001104_030 Hb_141016_010 Hb_141016_010 Hb_007017_050--Hb_141016_010 Hb_009711_060 Hb_009711_060 Hb_007017_050--Hb_009711_060 Hb_002362_010 Hb_002362_010 Hb_001318_160--Hb_002362_010 Hb_144649_010 Hb_144649_010 Hb_001318_160--Hb_144649_010 Hb_001318_160--Hb_000896_130 Hb_000756_030 Hb_000756_030 Hb_001318_160--Hb_000756_030 Hb_011063_040--Hb_000556_030 Hb_104034_010 Hb_104034_010 Hb_011063_040--Hb_104034_010 Hb_011063_040--Hb_168241_010 Hb_011063_040--Hb_007017_050 Hb_002613_030 Hb_002613_030 Hb_000896_130--Hb_002613_030 Hb_000896_130--Hb_144649_010 Hb_003762_010 Hb_003762_010 Hb_000896_130--Hb_003762_010 Hb_002486_090 Hb_002486_090 Hb_000896_130--Hb_002486_090 Hb_000083_110 Hb_000083_110 Hb_000896_130--Hb_000083_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.379006 0.126544 0.0544892 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis