Hb_000556_030

Information

Type -
Description -
Location Contig556: 37646-38716
Sequence    

Annotation

kegg
ID rcu:RCOM_1612640
description Gibberellin receptor GID1, putative
nr
ID XP_012083848.1
description PREDICTED: probable carboxylesterase 9 [Jatropha curcas]
swissprot
ID O64641
description Probable carboxylesterase 9 OS=Arabidopsis thaliana GN=CXE9 PE=2 SV=1
trembl
ID E6NU33
description JHL05D22.14 protein OS=Jatropha curcas GN=JHL05D22.14 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000556_030 0.0 - - PREDICTED: probable carboxylesterase 9 [Jatropha curcas]
2 Hb_011063_040 0.1268556452 - - PREDICTED: uncharacterized protein LOC100853799 [Vitis vinifera]
3 Hb_168241_010 0.167593394 - - hypothetical protein POPTR_0013s14620g, partial [Populus trichocarpa]
4 Hb_007017_050 0.1865223029 - - conserved hypothetical protein [Ricinus communis]
5 Hb_033312_100 0.1899696521 - - -
6 Hb_046204_010 0.1980977812 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
7 Hb_000531_010 0.1984270164 transcription factor TF Family: G2-like hypothetical protein POPTR_0018s14830g [Populus trichocarpa]
8 Hb_184109_010 0.2002245689 - - PREDICTED: transcription factor WER-like [Jatropha curcas]
9 Hb_002025_280 0.2007743016 - - PREDICTED: uncharacterized protein LOC105634201 [Jatropha curcas]
10 Hb_000422_040 0.2027679062 - - hypothetical protein CICLE_v10013147mg [Citrus clementina]
11 Hb_007304_020 0.2036088834 - - PREDICTED: uncharacterized protein LOC100256879 [Vitis vinifera]
12 Hb_002766_070 0.2037359042 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
13 Hb_059502_010 0.2054512607 - - PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Jatropha curcas]
14 Hb_001384_030 0.2085787339 - - PREDICTED: uncharacterized protein LOC105049010 [Elaeis guineensis]
15 Hb_000679_290 0.208633089 transcription factor TF Family: AUX/IAA ATP binding protein, putative [Ricinus communis]
16 Hb_074674_010 0.208740616 - - Cell division cycle protein cdt2, putative [Ricinus communis]
17 Hb_001247_060 0.2115499061 - - zinc finger protein, putative [Ricinus communis]
18 Hb_071116_010 0.212547969 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]
19 Hb_010775_020 0.2154438897 transcription factor TF Family: ERF Floral homeotic protein APETALA2, putative [Ricinus communis]
20 Hb_072201_010 0.2176479252 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]

Gene co-expression network

sample Hb_000556_030 Hb_000556_030 Hb_011063_040 Hb_011063_040 Hb_000556_030--Hb_011063_040 Hb_168241_010 Hb_168241_010 Hb_000556_030--Hb_168241_010 Hb_007017_050 Hb_007017_050 Hb_000556_030--Hb_007017_050 Hb_033312_100 Hb_033312_100 Hb_000556_030--Hb_033312_100 Hb_046204_010 Hb_046204_010 Hb_000556_030--Hb_046204_010 Hb_000531_010 Hb_000531_010 Hb_000556_030--Hb_000531_010 Hb_184109_010 Hb_184109_010 Hb_011063_040--Hb_184109_010 Hb_104034_010 Hb_104034_010 Hb_011063_040--Hb_104034_010 Hb_000866_350 Hb_000866_350 Hb_011063_040--Hb_000866_350 Hb_011063_040--Hb_168241_010 Hb_011063_040--Hb_007017_050 Hb_168241_010--Hb_007017_050 Hb_168241_010--Hb_184109_010 Hb_071116_010 Hb_071116_010 Hb_168241_010--Hb_071116_010 Hb_168241_010--Hb_000866_350 Hb_000053_140 Hb_000053_140 Hb_168241_010--Hb_000053_140 Hb_007017_050--Hb_184109_010 Hb_004375_090 Hb_004375_090 Hb_007017_050--Hb_004375_090 Hb_001104_030 Hb_001104_030 Hb_007017_050--Hb_001104_030 Hb_141016_010 Hb_141016_010 Hb_007017_050--Hb_141016_010 Hb_009711_060 Hb_009711_060 Hb_007017_050--Hb_009711_060 Hb_002025_280 Hb_002025_280 Hb_033312_100--Hb_002025_280 Hb_033312_100--Hb_000531_010 Hb_002766_070 Hb_002766_070 Hb_033312_100--Hb_002766_070 Hb_000422_040 Hb_000422_040 Hb_033312_100--Hb_000422_040 Hb_059502_010 Hb_059502_010 Hb_033312_100--Hb_059502_010 Hb_033312_100--Hb_046204_010 Hb_001384_030 Hb_001384_030 Hb_046204_010--Hb_001384_030 Hb_074674_010 Hb_074674_010 Hb_046204_010--Hb_074674_010 Hb_007304_020 Hb_007304_020 Hb_046204_010--Hb_007304_020 Hb_046204_010--Hb_000422_040 Hb_000138_120 Hb_000138_120 Hb_046204_010--Hb_000138_120 Hb_000531_010--Hb_059502_010 Hb_000531_010--Hb_002025_280 Hb_000531_010--Hb_002766_070 Hb_180864_010 Hb_180864_010 Hb_000531_010--Hb_180864_010 Hb_085600_010 Hb_085600_010 Hb_000531_010--Hb_085600_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.125235 0.116387 0.0190723 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0147036 0

CAGE analysis