Hb_104034_010

Information

Type -
Description -
Location Contig104034: 435-979
Sequence    

Annotation

kegg
ID pxb:103959647
description G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410
nr
ID XP_009370304.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Pyrus x bretschneideri]
swissprot
ID -
description -
trembl
ID A5BXA3
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005348 PE=4 SV=1
Gene Ontology
ID GO:0000166
description g-type lectin s-receptor-like serine threonine-protein kinase at1g11410

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_104034_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 [Pyrus x bretschneideri]
2 Hb_011063_040 0.1737321941 - - PREDICTED: uncharacterized protein LOC100853799 [Vitis vinifera]
3 Hb_010021_060 0.2384717201 - - PREDICTED: kinesin-related protein 11 isoform X1 [Jatropha curcas]
4 Hb_006120_140 0.2404522951 - - PREDICTED: gibberellin 2-beta-dioxygenase 2 [Jatropha curcas]
5 Hb_000621_100 0.2416472259 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000321_040 0.2481019746 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 5 [Jatropha curcas]
7 Hb_000000_040 0.2508603019 - - PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Jatropha curcas]
8 Hb_001890_040 0.2511800171 - - receptor-kinase, putative [Ricinus communis]
9 Hb_020273_020 0.2524928887 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_028013_030 0.2564236225 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_036182_010 0.2575120481 - - hypothetical protein POPTR_0473s00220g [Populus trichocarpa]
12 Hb_000001_150 0.2597249222 - - PREDICTED: uncharacterized protein LOC105138186 isoform X1 [Populus euphratica]
13 Hb_001769_150 0.2629192848 - - PREDICTED: uncharacterized protein LOC105633924 [Jatropha curcas]
14 Hb_005066_050 0.2643633033 - - -
15 Hb_000025_770 0.2655408239 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
16 Hb_061361_010 0.2668238146 - - kinase, putative [Ricinus communis]
17 Hb_000103_460 0.2669566807 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
18 Hb_000556_030 0.2687443179 - - PREDICTED: probable carboxylesterase 9 [Jatropha curcas]
19 Hb_002811_210 0.2716459929 - - PREDICTED: serine/threonine-protein kinase Nek1 isoform X1 [Jatropha curcas]
20 Hb_000866_350 0.2738781396 - - -

Gene co-expression network

sample Hb_104034_010 Hb_104034_010 Hb_011063_040 Hb_011063_040 Hb_104034_010--Hb_011063_040 Hb_010021_060 Hb_010021_060 Hb_104034_010--Hb_010021_060 Hb_006120_140 Hb_006120_140 Hb_104034_010--Hb_006120_140 Hb_000621_100 Hb_000621_100 Hb_104034_010--Hb_000621_100 Hb_000321_040 Hb_000321_040 Hb_104034_010--Hb_000321_040 Hb_000000_040 Hb_000000_040 Hb_104034_010--Hb_000000_040 Hb_000556_030 Hb_000556_030 Hb_011063_040--Hb_000556_030 Hb_184109_010 Hb_184109_010 Hb_011063_040--Hb_184109_010 Hb_000866_350 Hb_000866_350 Hb_011063_040--Hb_000866_350 Hb_168241_010 Hb_168241_010 Hb_011063_040--Hb_168241_010 Hb_007017_050 Hb_007017_050 Hb_011063_040--Hb_007017_050 Hb_001454_180 Hb_001454_180 Hb_010021_060--Hb_001454_180 Hb_002837_030 Hb_002837_030 Hb_010021_060--Hb_002837_030 Hb_162378_020 Hb_162378_020 Hb_010021_060--Hb_162378_020 Hb_011063_030 Hb_011063_030 Hb_010021_060--Hb_011063_030 Hb_002686_070 Hb_002686_070 Hb_010021_060--Hb_002686_070 Hb_007044_260 Hb_007044_260 Hb_010021_060--Hb_007044_260 Hb_006120_140--Hb_000621_100 Hb_006120_140--Hb_000000_040 Hb_020273_020 Hb_020273_020 Hb_006120_140--Hb_020273_020 Hb_006120_140--Hb_000321_040 Hb_001890_040 Hb_001890_040 Hb_006120_140--Hb_001890_040 Hb_005066_050 Hb_005066_050 Hb_006120_140--Hb_005066_050 Hb_000621_100--Hb_000000_040 Hb_000025_770 Hb_000025_770 Hb_000621_100--Hb_000025_770 Hb_000621_100--Hb_000321_040 Hb_061361_010 Hb_061361_010 Hb_000621_100--Hb_061361_010 Hb_000621_100--Hb_005066_050 Hb_000321_040--Hb_020273_020 Hb_000321_040--Hb_000000_040 Hb_000321_040--Hb_001890_040 Hb_028013_030 Hb_028013_030 Hb_000321_040--Hb_028013_030 Hb_000000_040--Hb_020273_020 Hb_000000_040--Hb_005066_050 Hb_008725_110 Hb_008725_110 Hb_000000_040--Hb_008725_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.715329 0.179857 0.12988 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.161097 0

CAGE analysis