Hb_002362_010

Information

Type -
Description -
Location Contig2362: 4503-5375
Sequence    

Annotation

kegg
ID pop:POPTR_0007s11740g
description POPTRDRAFT_1083288; hypothetical protein
nr
ID KDP31867.1
description hypothetical protein JCGZ_12328 [Jatropha curcas]
swissprot
ID F4IMK4
description Putative methylesterase 19 OS=Arabidopsis thaliana GN=MES19 PE=2 SV=2
trembl
ID A0A067K6Y4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12328 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002362_010 0.0 - - hypothetical protein JCGZ_12328 [Jatropha curcas]
2 Hb_144649_010 0.0959831108 - - 60S ribosomal protein L34A [Hevea brasiliensis]
3 Hb_000756_030 0.1097680285 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
4 Hb_000654_060 0.1098951206 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
5 Hb_152528_010 0.1126570526 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
6 Hb_108744_010 0.1285509103 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
7 Hb_022845_010 0.1313254801 - - PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Jatropha curcas]
8 Hb_001318_160 0.1334032252 - - Polygalacturonase precursor, putative [Ricinus communis]
9 Hb_001398_110 0.1355207156 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
10 Hb_000331_020 0.1409509288 - - cytochrome P450, putative [Ricinus communis]
11 Hb_022465_010 0.1487538356 - - hypothetical protein JCGZ_06012 [Jatropha curcas]
12 Hb_000045_290 0.1490831671 - - -
13 Hb_004241_140 0.1519401587 - - S-locus lectin protein kinase family protein, putative [Theobroma cacao]
14 Hb_001190_030 0.1519487564 - - hypothetical protein VITISV_017115 [Vitis vinifera]
15 Hb_001322_220 0.1562767636 - - Major pollen allergen Ory s 1 precursor, putative [Ricinus communis]
16 Hb_005649_070 0.1620452605 - - conserved hypothetical protein [Ricinus communis]
17 Hb_034498_010 0.1643573156 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
18 Hb_001117_020 0.1671349051 - - hypothetical protein CICLE_v10008579mg [Citrus clementina]
19 Hb_006142_020 0.1693116515 - - JHL25P11.12 [Jatropha curcas]
20 Hb_000160_110 0.1698016654 - - PREDICTED: uncharacterized protein LOC100253584 [Vitis vinifera]

Gene co-expression network

sample Hb_002362_010 Hb_002362_010 Hb_144649_010 Hb_144649_010 Hb_002362_010--Hb_144649_010 Hb_000756_030 Hb_000756_030 Hb_002362_010--Hb_000756_030 Hb_000654_060 Hb_000654_060 Hb_002362_010--Hb_000654_060 Hb_152528_010 Hb_152528_010 Hb_002362_010--Hb_152528_010 Hb_108744_010 Hb_108744_010 Hb_002362_010--Hb_108744_010 Hb_022845_010 Hb_022845_010 Hb_002362_010--Hb_022845_010 Hb_005649_070 Hb_005649_070 Hb_144649_010--Hb_005649_070 Hb_144649_010--Hb_108744_010 Hb_144649_010--Hb_000756_030 Hb_004241_140 Hb_004241_140 Hb_144649_010--Hb_004241_140 Hb_144649_010--Hb_152528_010 Hb_000756_030--Hb_152528_010 Hb_000756_030--Hb_108744_010 Hb_000756_030--Hb_000654_060 Hb_006142_020 Hb_006142_020 Hb_000756_030--Hb_006142_020 Hb_000756_030--Hb_004241_140 Hb_001398_110 Hb_001398_110 Hb_000756_030--Hb_001398_110 Hb_000654_060--Hb_152528_010 Hb_000654_060--Hb_022845_010 Hb_000654_060--Hb_108744_010 Hb_000654_060--Hb_001398_110 Hb_022465_010 Hb_022465_010 Hb_000654_060--Hb_022465_010 Hb_152528_010--Hb_108744_010 Hb_152528_010--Hb_001398_110 Hb_152528_010--Hb_022845_010 Hb_152528_010--Hb_004241_140 Hb_108744_010--Hb_006142_020 Hb_169136_010 Hb_169136_010 Hb_108744_010--Hb_169136_010 Hb_108744_010--Hb_005649_070 Hb_001322_220 Hb_001322_220 Hb_022845_010--Hb_001322_220 Hb_001190_030 Hb_001190_030 Hb_022845_010--Hb_001190_030 Hb_120289_010 Hb_120289_010 Hb_022845_010--Hb_120289_010 Hb_000162_160 Hb_000162_160 Hb_022845_010--Hb_000162_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.932654 9.76393 4.72453 0.281912 0.0862415
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis