Hb_000083_110

Information

Type -
Description -
Location Contig83: 202695-203522
Sequence    

Annotation

kegg
ID tcc:TCM_001000
description Dicarboxylate carrier 2
nr
ID XP_012069186.1
description PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
swissprot
ID Q9SJY5
description Mitochondrial uncoupling protein 5 OS=Arabidopsis thaliana GN=PUMP5 PE=2 SV=1
trembl
ID A0A067KXS0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24951 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000083_110 0.0 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
2 Hb_103339_010 0.1553834025 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_001279_050 0.1693720616 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
4 Hb_002307_040 0.1721992759 - - DNA binding protein, putative [Ricinus communis]
5 Hb_028487_120 0.1754557541 - - PREDICTED: HMG-Y-related protein B-like [Jatropha curcas]
6 Hb_000960_120 0.1763458814 - - PREDICTED: cell division cycle 20.1, cofactor of APC complex-like [Jatropha curcas]
7 Hb_002613_030 0.1787060124 transcription factor TF Family: GRF conserved hypothetical protein [Ricinus communis]
8 Hb_000083_280 0.1796997212 - - copper ion binding protein, putative [Ricinus communis]
9 Hb_039812_010 0.1801069844 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
10 Hb_113974_010 0.1806404799 - - DNA binding protein, putative [Ricinus communis]
11 Hb_002486_090 0.1810820898 - - hypothetical protein POPTR_0005s06910g [Populus trichocarpa]
12 Hb_000896_130 0.1814271436 transcription factor TF Family: CPP cysteine-rich polycomb-like family protein [Populus trichocarpa]
13 Hb_034310_010 0.1818072685 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
14 Hb_000748_100 0.1837929644 - - hypothetical protein POPTR_0002s06160g [Populus trichocarpa]
15 Hb_003935_050 0.1862590261 - - protein with unknown function [Ricinus communis]
16 Hb_028187_010 0.1882483828 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
17 Hb_002218_050 0.1884366638 - - SSXT family protein isoform 2, partial [Theobroma cacao]
18 Hb_022092_040 0.1886441779 - - PREDICTED: serine/arginine repetitive matrix protein 1 [Jatropha curcas]
19 Hb_000157_060 0.1890685418 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
20 Hb_003767_030 0.1949667302 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]

Gene co-expression network

sample Hb_000083_110 Hb_000083_110 Hb_103339_010 Hb_103339_010 Hb_000083_110--Hb_103339_010 Hb_001279_050 Hb_001279_050 Hb_000083_110--Hb_001279_050 Hb_002307_040 Hb_002307_040 Hb_000083_110--Hb_002307_040 Hb_028487_120 Hb_028487_120 Hb_000083_110--Hb_028487_120 Hb_000960_120 Hb_000960_120 Hb_000083_110--Hb_000960_120 Hb_002613_030 Hb_002613_030 Hb_000083_110--Hb_002613_030 Hb_004007_080 Hb_004007_080 Hb_103339_010--Hb_004007_080 Hb_000527_030 Hb_000527_030 Hb_103339_010--Hb_000527_030 Hb_004422_030 Hb_004422_030 Hb_103339_010--Hb_004422_030 Hb_006519_020 Hb_006519_020 Hb_103339_010--Hb_006519_020 Hb_169753_010 Hb_169753_010 Hb_103339_010--Hb_169753_010 Hb_000083_280 Hb_000083_280 Hb_103339_010--Hb_000083_280 Hb_001279_050--Hb_028487_120 Hb_000748_100 Hb_000748_100 Hb_001279_050--Hb_000748_100 Hb_001279_050--Hb_002307_040 Hb_000367_240 Hb_000367_240 Hb_001279_050--Hb_000367_240 Hb_000069_400 Hb_000069_400 Hb_001279_050--Hb_000069_400 Hb_002221_010 Hb_002221_010 Hb_001279_050--Hb_002221_010 Hb_005686_100 Hb_005686_100 Hb_002307_040--Hb_005686_100 Hb_002307_040--Hb_000748_100 Hb_001433_120 Hb_001433_120 Hb_002307_040--Hb_001433_120 Hb_002307_040--Hb_000069_400 Hb_002307_040--Hb_002221_010 Hb_008406_100 Hb_008406_100 Hb_028487_120--Hb_008406_100 Hb_022092_040 Hb_022092_040 Hb_028487_120--Hb_022092_040 Hb_000638_260 Hb_000638_260 Hb_028487_120--Hb_000638_260 Hb_028487_120--Hb_000960_120 Hb_024973_020 Hb_024973_020 Hb_028487_120--Hb_024973_020 Hb_013344_010 Hb_013344_010 Hb_000960_120--Hb_013344_010 Hb_001761_010 Hb_001761_010 Hb_000960_120--Hb_001761_010 Hb_000960_120--Hb_022092_040 Hb_002811_210 Hb_002811_210 Hb_000960_120--Hb_002811_210 Hb_006060_010 Hb_006060_010 Hb_000960_120--Hb_006060_010 Hb_000960_120--Hb_008406_100 Hb_002486_090 Hb_002486_090 Hb_002613_030--Hb_002486_090 Hb_004724_250 Hb_004724_250 Hb_002613_030--Hb_004724_250 Hb_000896_130 Hb_000896_130 Hb_002613_030--Hb_000896_130 Hb_000164_030 Hb_000164_030 Hb_002613_030--Hb_000164_030 Hb_064971_010 Hb_064971_010 Hb_002613_030--Hb_064971_010 Hb_048141_060 Hb_048141_060 Hb_002613_030--Hb_048141_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.136942 0.305668 3.90243 0.716811 0.210872 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0267551 0.129541

CAGE analysis