Hb_000256_170

Information

Type -
Description -
Location Contig256: 258299-258637
Sequence    

Annotation

kegg
ID rcu:RCOM_0922710
description hypothetical protein
nr
ID XP_012077505.1
description PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KEV6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07119 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000256_170 0.0 - - PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
2 Hb_000574_180 0.0464185818 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
3 Hb_000413_220 0.0790833421 - - PREDICTED: kinesin-1 [Jatropha curcas]
4 Hb_000739_250 0.0928797776 - - PREDICTED: uncharacterized protein LOC105120821 [Populus euphratica]
5 Hb_000331_020 0.1056751497 - - cytochrome P450, putative [Ricinus communis]
6 Hb_000397_170 0.1144498548 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000668_190 0.1147514361 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
8 Hb_004241_140 0.1199374437 - - S-locus lectin protein kinase family protein, putative [Theobroma cacao]
9 Hb_005649_070 0.1207864801 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004586_050 0.1241725274 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
11 Hb_152528_010 0.12492213 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
12 Hb_000045_290 0.1255907417 - - -
13 Hb_000756_030 0.1263708914 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
14 Hb_003226_060 0.1264454775 - - Pectinesterase-2 precursor, putative [Ricinus communis]
15 Hb_108744_010 0.1273682269 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
16 Hb_001398_110 0.128652846 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
17 Hb_001754_100 0.1341098076 - - PREDICTED: peroxidase 5-like [Jatropha curcas]
18 Hb_005141_020 0.1367415869 - - laccase, putative [Ricinus communis]
19 Hb_034498_010 0.1390166699 - - PREDICTED: uncharacterized protein LOC105636842 [Jatropha curcas]
20 Hb_000654_060 0.1444727145 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]

Gene co-expression network

sample Hb_000256_170 Hb_000256_170 Hb_000574_180 Hb_000574_180 Hb_000256_170--Hb_000574_180 Hb_000413_220 Hb_000413_220 Hb_000256_170--Hb_000413_220 Hb_000739_250 Hb_000739_250 Hb_000256_170--Hb_000739_250 Hb_000331_020 Hb_000331_020 Hb_000256_170--Hb_000331_020 Hb_000397_170 Hb_000397_170 Hb_000256_170--Hb_000397_170 Hb_000668_190 Hb_000668_190 Hb_000256_170--Hb_000668_190 Hb_000574_180--Hb_000413_220 Hb_000574_180--Hb_000739_250 Hb_000574_180--Hb_000668_190 Hb_000574_180--Hb_000397_170 Hb_001754_100 Hb_001754_100 Hb_000574_180--Hb_001754_100 Hb_000413_220--Hb_000668_190 Hb_000413_220--Hb_000739_250 Hb_150745_010 Hb_150745_010 Hb_000413_220--Hb_150745_010 Hb_000413_220--Hb_001754_100 Hb_000739_250--Hb_000668_190 Hb_002486_090 Hb_002486_090 Hb_000739_250--Hb_002486_090 Hb_005141_020 Hb_005141_020 Hb_000739_250--Hb_005141_020 Hb_004586_050 Hb_004586_050 Hb_000331_020--Hb_004586_050 Hb_001398_110 Hb_001398_110 Hb_000331_020--Hb_001398_110 Hb_000045_290 Hb_000045_290 Hb_000331_020--Hb_000045_290 Hb_004241_140 Hb_004241_140 Hb_000331_020--Hb_004241_140 Hb_001117_020 Hb_001117_020 Hb_000331_020--Hb_001117_020 Hb_152528_010 Hb_152528_010 Hb_000331_020--Hb_152528_010 Hb_003226_060 Hb_003226_060 Hb_000397_170--Hb_003226_060 Hb_000397_170--Hb_001754_100 Hb_005599_010 Hb_005599_010 Hb_000397_170--Hb_005599_010 Hb_000397_170--Hb_150745_010 Hb_002534_040 Hb_002534_040 Hb_000668_190--Hb_002534_040 Hb_000164_030 Hb_000164_030 Hb_000668_190--Hb_000164_030 Hb_002435_010 Hb_002435_010 Hb_000668_190--Hb_002435_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.682874 5.33298 1.83736 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.197692 0

CAGE analysis