Hb_000668_190

Information

Type -
Description -
Location Contig668: 141646-145247
Sequence    

Annotation

kegg
ID rcu:RCOM_1033780
description Aspartic proteinase nepenthesin-2 precursor, putative
nr
ID XP_002513870.1
description Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
swissprot
ID Q9LX20
description Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1
trembl
ID B9RJF1
description Aspartic proteinase nepenthesin-2, putative OS=Ricinus communis GN=RCOM_1033780 PE=3 SV=1
Gene Ontology
ID GO:0004190
description aspartic proteinase-like protein 1 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000668_190 0.0 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
2 Hb_000413_220 0.061959961 - - PREDICTED: kinesin-1 [Jatropha curcas]
3 Hb_002534_040 0.0749439557 - - Calmodulin, putative [Ricinus communis]
4 Hb_000739_250 0.0950771427 - - PREDICTED: uncharacterized protein LOC105120821 [Populus euphratica]
5 Hb_000574_180 0.095253605 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
6 Hb_000164_030 0.105037925 - - PREDICTED: RING-H2 finger protein ATL14-like [Zea mays]
7 Hb_002435_010 0.1059524828 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
8 Hb_048141_060 0.1073071972 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT3 [Populus euphratica]
9 Hb_002486_090 0.1089967126 - - hypothetical protein POPTR_0005s06910g [Populus trichocarpa]
10 Hb_004724_250 0.1147339107 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
11 Hb_000256_170 0.1147514361 - - PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
12 Hb_064971_010 0.1294389052 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
13 Hb_002267_010 0.1311540354 - - hypothetical protein SORBIDRAFT_01g040370 [Sorghum bicolor]
14 Hb_000157_060 0.1322367544 - - PREDICTED: polyamine oxidase 1 isoform X1 [Jatropha curcas]
15 Hb_000574_270 0.1330279906 - - PREDICTED: VQ motif-containing protein 11 [Jatropha curcas]
16 Hb_000340_070 0.1358568971 - - PREDICTED: CSC1-like protein At4g02900 [Jatropha curcas]
17 Hb_005649_070 0.1377337838 - - conserved hypothetical protein [Ricinus communis]
18 Hb_150745_010 0.1397046 - - hypothetical protein JCGZ_17337 [Jatropha curcas]
19 Hb_052764_120 0.1471046486 - - PREDICTED: uncharacterized protein LOC103941142 [Pyrus x bretschneideri]
20 Hb_028187_010 0.1478594875 - - hypothetical protein JCGZ_23781 [Jatropha curcas]

Gene co-expression network

sample Hb_000668_190 Hb_000668_190 Hb_000413_220 Hb_000413_220 Hb_000668_190--Hb_000413_220 Hb_002534_040 Hb_002534_040 Hb_000668_190--Hb_002534_040 Hb_000739_250 Hb_000739_250 Hb_000668_190--Hb_000739_250 Hb_000574_180 Hb_000574_180 Hb_000668_190--Hb_000574_180 Hb_000164_030 Hb_000164_030 Hb_000668_190--Hb_000164_030 Hb_002435_010 Hb_002435_010 Hb_000668_190--Hb_002435_010 Hb_000413_220--Hb_000574_180 Hb_000256_170 Hb_000256_170 Hb_000413_220--Hb_000256_170 Hb_000413_220--Hb_000739_250 Hb_150745_010 Hb_150745_010 Hb_000413_220--Hb_150745_010 Hb_001754_100 Hb_001754_100 Hb_000413_220--Hb_001754_100 Hb_000340_070 Hb_000340_070 Hb_002534_040--Hb_000340_070 Hb_002534_040--Hb_000413_220 Hb_002534_040--Hb_002435_010 Hb_004724_250 Hb_004724_250 Hb_002534_040--Hb_004724_250 Hb_010672_040 Hb_010672_040 Hb_002534_040--Hb_010672_040 Hb_000739_250--Hb_000574_180 Hb_000739_250--Hb_000256_170 Hb_002486_090 Hb_002486_090 Hb_000739_250--Hb_002486_090 Hb_005141_020 Hb_005141_020 Hb_000739_250--Hb_005141_020 Hb_000574_180--Hb_000256_170 Hb_000397_170 Hb_000397_170 Hb_000574_180--Hb_000397_170 Hb_000574_180--Hb_001754_100 Hb_048141_060 Hb_048141_060 Hb_000164_030--Hb_048141_060 Hb_000164_030--Hb_004724_250 Hb_064971_010 Hb_064971_010 Hb_000164_030--Hb_064971_010 Hb_005649_070 Hb_005649_070 Hb_000164_030--Hb_005649_070 Hb_002267_010 Hb_002267_010 Hb_000164_030--Hb_002267_010 Hb_000157_060 Hb_000157_060 Hb_000164_030--Hb_000157_060 Hb_052764_120 Hb_052764_120 Hb_002435_010--Hb_052764_120 Hb_002435_010--Hb_002267_010 Hb_010578_020 Hb_010578_020 Hb_002435_010--Hb_010578_020 Hb_003207_220 Hb_003207_220 Hb_002435_010--Hb_003207_220 Hb_002435_010--Hb_048141_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.299405 2.3694 0.396757 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0681527 0

CAGE analysis