Hb_010812_060

Information

Type -
Description -
Location Contig10812: 40269-45094
Sequence    

Annotation

kegg
ID rcu:RCOM_0690150
description hypothetical protein
nr
ID XP_012091116.1
description PREDICTED: uncharacterized protein LOC105649158 [Jatropha curcas]
swissprot
ID Q9FHK4
description Uncharacterized protein At5g05190 OS=Arabidopsis thaliana GN=Y-1 PE=1 SV=1
trembl
ID A0A067JQ36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03300 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02492: 40909-41325 , PASA_asmbl_02496: 43252-45160 , PASA_asmbl_02497: 43267-43564
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010812_060 0.0 - - PREDICTED: uncharacterized protein LOC105649158 [Jatropha curcas]
2 Hb_001366_390 0.0943991459 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]
3 Hb_000071_090 0.1065296705 - - PREDICTED: probable protein phosphatase 2C 4 [Jatropha curcas]
4 Hb_002609_290 0.1075337932 - - PREDICTED: non-specific phospholipase C1 [Jatropha curcas]
5 Hb_007130_020 0.1095930714 - - -
6 Hb_089305_010 0.1102315108 - - PREDICTED: U-box domain-containing protein 26-like [Jatropha curcas]
7 Hb_001254_020 0.1145085793 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
8 Hb_000567_330 0.1245373349 - - PREDICTED: probable metal-nicotianamine transporter YSL7 [Jatropha curcas]
9 Hb_000032_090 0.1288956338 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000110_260 0.1338319665 - - PREDICTED: uncharacterized protein LOC105642009 [Jatropha curcas]
11 Hb_001989_070 0.1365251978 - - PREDICTED: uncharacterized calcium-binding protein At1g02270 [Jatropha curcas]
12 Hb_073171_050 0.1367410289 transcription factor TF Family: MYB-related PREDICTED: myb-like protein H [Jatropha curcas]
13 Hb_007483_080 0.1374663946 - - hypothetical protein RCOM_0634810 [Ricinus communis]
14 Hb_004040_010 0.1397974805 - - hypothetical protein POPTR_0019s14250g [Populus trichocarpa]
15 Hb_007193_030 0.1408606214 transcription factor TF Family: Jumonji PREDICTED: lysine-specific demethylase JMJ706 isoform X1 [Jatropha curcas]
16 Hb_044653_050 0.1410822529 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
17 Hb_001357_060 0.1414005828 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 18-like [Cicer arietinum]
18 Hb_000049_280 0.142240118 - - PREDICTED: ribokinase-like isoform X4 [Jatropha curcas]
19 Hb_001179_010 0.1433780701 - - PREDICTED: glycosyltransferase family protein 64 protein C5 [Jatropha curcas]
20 Hb_189208_060 0.1434286184 - - PREDICTED: two-pore potassium channel 5 [Jatropha curcas]

Gene co-expression network

sample Hb_010812_060 Hb_010812_060 Hb_001366_390 Hb_001366_390 Hb_010812_060--Hb_001366_390 Hb_000071_090 Hb_000071_090 Hb_010812_060--Hb_000071_090 Hb_002609_290 Hb_002609_290 Hb_010812_060--Hb_002609_290 Hb_007130_020 Hb_007130_020 Hb_010812_060--Hb_007130_020 Hb_089305_010 Hb_089305_010 Hb_010812_060--Hb_089305_010 Hb_001254_020 Hb_001254_020 Hb_010812_060--Hb_001254_020 Hb_004040_010 Hb_004040_010 Hb_001366_390--Hb_004040_010 Hb_000002_370 Hb_000002_370 Hb_001366_390--Hb_000002_370 Hb_018134_010 Hb_018134_010 Hb_001366_390--Hb_018134_010 Hb_011794_050 Hb_011794_050 Hb_001366_390--Hb_011794_050 Hb_000185_130 Hb_000185_130 Hb_001366_390--Hb_000185_130 Hb_008406_070 Hb_008406_070 Hb_000071_090--Hb_008406_070 Hb_003078_070 Hb_003078_070 Hb_000071_090--Hb_003078_070 Hb_002374_030 Hb_002374_030 Hb_000071_090--Hb_002374_030 Hb_001769_120 Hb_001769_120 Hb_000071_090--Hb_001769_120 Hb_189208_060 Hb_189208_060 Hb_000071_090--Hb_189208_060 Hb_000985_140 Hb_000985_140 Hb_000071_090--Hb_000985_140 Hb_011381_070 Hb_011381_070 Hb_002609_290--Hb_011381_070 Hb_000366_050 Hb_000366_050 Hb_002609_290--Hb_000366_050 Hb_001158_120 Hb_001158_120 Hb_002609_290--Hb_001158_120 Hb_002997_110 Hb_002997_110 Hb_002609_290--Hb_002997_110 Hb_001627_010 Hb_001627_010 Hb_002609_290--Hb_001627_010 Hb_044653_050 Hb_044653_050 Hb_007130_020--Hb_044653_050 Hb_002311_280 Hb_002311_280 Hb_007130_020--Hb_002311_280 Hb_000836_090 Hb_000836_090 Hb_007130_020--Hb_000836_090 Hb_006922_020 Hb_006922_020 Hb_007130_020--Hb_006922_020 Hb_033006_020 Hb_033006_020 Hb_007130_020--Hb_033006_020 Hb_004228_070 Hb_004228_070 Hb_007130_020--Hb_004228_070 Hb_000120_090 Hb_000120_090 Hb_089305_010--Hb_000120_090 Hb_001621_050 Hb_001621_050 Hb_089305_010--Hb_001621_050 Hb_000567_330 Hb_000567_330 Hb_089305_010--Hb_000567_330 Hb_000110_260 Hb_000110_260 Hb_089305_010--Hb_000110_260 Hb_021409_110 Hb_021409_110 Hb_089305_010--Hb_021409_110 Hb_000032_090 Hb_000032_090 Hb_001254_020--Hb_000032_090 Hb_000418_060 Hb_000418_060 Hb_001254_020--Hb_000418_060 Hb_004393_030 Hb_004393_030 Hb_001254_020--Hb_004393_030 Hb_007007_030 Hb_007007_030 Hb_001254_020--Hb_007007_030 Hb_001254_020--Hb_000071_090 Hb_001610_070 Hb_001610_070 Hb_001254_020--Hb_001610_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.266556 10.0844 13.4801 8.53331 0.128491 0.55902
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0847415 0.222285 0.361583 1.59995 6.71394

CAGE analysis