Hb_010137_060

Information

Type -
Description -
Location Contig10137: 72759-76725
Sequence    

Annotation

kegg
ID pop:POPTR_0004s24270g
description hypothetical protein
nr
ID XP_012072655.1
description PREDICTED: uncharacterized protein LOC105634409 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KS59
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06715 PE=4 SV=1
Gene Ontology
ID GO:0009941
description PREDICTED: uncharacterized protein LOC105634409

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00676: 72785-76414 , PASA_asmbl_00677: 76424-76686
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010137_060 0.0 - - PREDICTED: uncharacterized protein LOC105634409 [Jatropha curcas]
2 Hb_002897_090 0.1093746632 - - conserved hypothetical protein [Ricinus communis]
3 Hb_109000_020 0.1136561881 - - PREDICTED: uncharacterized protein LOC105633730 [Jatropha curcas]
4 Hb_003342_020 0.121625011 - - calcineurin B, putative [Ricinus communis]
5 Hb_000645_280 0.1227903576 - - PREDICTED: AMSH-like ubiquitin thioesterase 3 [Jatropha curcas]
6 Hb_122968_010 0.1258240531 - - hypothetical protein JCGZ_23576 [Jatropha curcas]
7 Hb_000482_190 0.126466163 - - PREDICTED: serine/threonine-protein kinase EDR1 [Jatropha curcas]
8 Hb_001051_050 0.1289830323 - - conserved hypothetical protein [Ricinus communis]
9 Hb_011224_050 0.131257984 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Populus euphratica]
10 Hb_011249_070 0.1312855559 - - hypothetical protein POPTR_0018s12610g [Populus trichocarpa]
11 Hb_007821_030 0.1335828114 - - 5'-nucleotidase domain-containing [Gossypium arboreum]
12 Hb_000438_110 0.1338483666 - - PREDICTED: adenine/guanine permease AZG1 [Jatropha curcas]
13 Hb_000684_210 0.1342850526 - - PREDICTED: uncharacterized protein LOC105642177 [Jatropha curcas]
14 Hb_001712_060 0.1345179359 - - PREDICTED: proline-rich receptor-like protein kinase PERK9 [Jatropha curcas]
15 Hb_002883_030 0.1349112088 - - PREDICTED: uncharacterized protein LOC105638222 [Jatropha curcas]
16 Hb_018272_020 0.1353060382 - - PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein alpha [Jatropha curcas]
17 Hb_091296_010 0.1361186902 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
18 Hb_000917_130 0.1368707521 - - PREDICTED: uncharacterized protein LOC105635730 [Jatropha curcas]
19 Hb_000773_040 0.138135216 - - PREDICTED: uncharacterized protein LOC105641863 isoform X2 [Jatropha curcas]
20 Hb_001440_020 0.1383617161 - - exocyst componenet sec8, putative [Ricinus communis]

Gene co-expression network

sample Hb_010137_060 Hb_010137_060 Hb_002897_090 Hb_002897_090 Hb_010137_060--Hb_002897_090 Hb_109000_020 Hb_109000_020 Hb_010137_060--Hb_109000_020 Hb_003342_020 Hb_003342_020 Hb_010137_060--Hb_003342_020 Hb_000645_280 Hb_000645_280 Hb_010137_060--Hb_000645_280 Hb_122968_010 Hb_122968_010 Hb_010137_060--Hb_122968_010 Hb_000482_190 Hb_000482_190 Hb_010137_060--Hb_000482_190 Hb_002027_080 Hb_002027_080 Hb_002897_090--Hb_002027_080 Hb_002883_030 Hb_002883_030 Hb_002897_090--Hb_002883_030 Hb_000359_210 Hb_000359_210 Hb_002897_090--Hb_000359_210 Hb_004679_030 Hb_004679_030 Hb_002897_090--Hb_004679_030 Hb_000441_090 Hb_000441_090 Hb_002897_090--Hb_000441_090 Hb_002897_090--Hb_122968_010 Hb_003878_150 Hb_003878_150 Hb_109000_020--Hb_003878_150 Hb_009328_020 Hb_009328_020 Hb_109000_020--Hb_009328_020 Hb_001232_190 Hb_001232_190 Hb_109000_020--Hb_001232_190 Hb_008616_050 Hb_008616_050 Hb_109000_020--Hb_008616_050 Hb_001662_100 Hb_001662_100 Hb_109000_020--Hb_001662_100 Hb_041290_020 Hb_041290_020 Hb_109000_020--Hb_041290_020 Hb_007597_010 Hb_007597_010 Hb_003342_020--Hb_007597_010 Hb_003929_070 Hb_003929_070 Hb_003342_020--Hb_003929_070 Hb_000322_070 Hb_000322_070 Hb_003342_020--Hb_000322_070 Hb_000692_150 Hb_000692_150 Hb_003342_020--Hb_000692_150 Hb_000260_720 Hb_000260_720 Hb_003342_020--Hb_000260_720 Hb_001405_210 Hb_001405_210 Hb_003342_020--Hb_001405_210 Hb_028487_070 Hb_028487_070 Hb_000645_280--Hb_028487_070 Hb_000684_210 Hb_000684_210 Hb_000645_280--Hb_000684_210 Hb_002232_390 Hb_002232_390 Hb_000645_280--Hb_002232_390 Hb_001051_050 Hb_001051_050 Hb_000645_280--Hb_001051_050 Hb_001347_060 Hb_001347_060 Hb_000645_280--Hb_001347_060 Hb_005800_030 Hb_005800_030 Hb_000645_280--Hb_005800_030 Hb_000656_070 Hb_000656_070 Hb_122968_010--Hb_000656_070 Hb_001789_110 Hb_001789_110 Hb_122968_010--Hb_001789_110 Hb_027073_020 Hb_027073_020 Hb_122968_010--Hb_027073_020 Hb_003117_030 Hb_003117_030 Hb_122968_010--Hb_003117_030 Hb_000406_200 Hb_000406_200 Hb_122968_010--Hb_000406_200 Hb_001712_060 Hb_001712_060 Hb_000482_190--Hb_001712_060 Hb_000482_190--Hb_001789_110 Hb_000482_190--Hb_000441_090 Hb_003517_040 Hb_003517_040 Hb_000482_190--Hb_003517_040 Hb_001936_090 Hb_001936_090 Hb_000482_190--Hb_001936_090 Hb_000258_070 Hb_000258_070 Hb_000482_190--Hb_000258_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.28786 8.05716 9.57742 17.9285 9.53345 15.0583
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.66412 14.8718 7.14977 9.93373 19.4622

CAGE analysis