Hb_008453_130

Information

Type -
Description -
Location Contig8453: 91279-95020
Sequence    

Annotation

kegg
ID rcu:RCOM_1598830
description Cucumisin precursor, putative (EC:3.4.21.25)
nr
ID KDP36888.1
description hypothetical protein JCGZ_08179 [Jatropha curcas]
swissprot
ID Q9LNU1
description CO(2)-response secreted protease OS=Arabidopsis thaliana GN=CRSP PE=2 SV=1
trembl
ID A0A067KPF2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08179 PE=4 SV=1
Gene Ontology
ID GO:0004252
description co -response secreted protease-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008453_130 0.0 - - hypothetical protein JCGZ_08179 [Jatropha curcas]
2 Hb_001546_160 0.2687852944 - - ankyrin repeat-containing protein, putative [Ricinus communis]
3 Hb_000710_090 0.2944370888 - - PREDICTED: uncharacterized protein LOC104583249 [Brachypodium distachyon]
4 Hb_000025_610 0.2983960457 - - annexin, putative [Ricinus communis]
5 Hb_000413_290 0.2998883605 - - -
6 Hb_143714_010 0.3092082718 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Populus euphratica]
7 Hb_087203_010 0.3171211684 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 68-like [Pyrus x bretschneideri]
8 Hb_003020_060 0.3241207696 - - PREDICTED: low-temperature-induced 65 kDa protein [Jatropha curcas]
9 Hb_002928_040 0.3260687242 - - PREDICTED: vinorine synthase-like [Jatropha curcas]
10 Hb_003581_270 0.3322669733 - - PREDICTED: protein kinase APK1A, chloroplastic-like isoform X1 [Citrus sinensis]
11 Hb_000062_100 0.3380868505 - - -
12 Hb_010366_010 0.3382452382 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
13 Hb_000613_230 0.3389019752 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000357_120 0.3394019526 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Jatropha curcas]
15 Hb_000366_010 0.3447416822 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like, partial [Pyrus x bretschneideri]
16 Hb_006520_050 0.352216183 - - conserved hypothetical protein [Ricinus communis]
17 Hb_102632_010 0.3532782009 - - PREDICTED: CST complex subunit STN1 [Jatropha curcas]
18 Hb_001247_110 0.3594266948 - - Polygalacturonase precursor, putative [Ricinus communis]
19 Hb_003159_100 0.3621137734 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
20 Hb_004712_150 0.3624641216 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_008453_130 Hb_008453_130 Hb_001546_160 Hb_001546_160 Hb_008453_130--Hb_001546_160 Hb_000710_090 Hb_000710_090 Hb_008453_130--Hb_000710_090 Hb_000025_610 Hb_000025_610 Hb_008453_130--Hb_000025_610 Hb_000413_290 Hb_000413_290 Hb_008453_130--Hb_000413_290 Hb_143714_010 Hb_143714_010 Hb_008453_130--Hb_143714_010 Hb_087203_010 Hb_087203_010 Hb_008453_130--Hb_087203_010 Hb_001247_110 Hb_001247_110 Hb_001546_160--Hb_001247_110 Hb_002799_130 Hb_002799_130 Hb_001546_160--Hb_002799_130 Hb_000699_100 Hb_000699_100 Hb_001546_160--Hb_000699_100 Hb_002290_020 Hb_002290_020 Hb_001546_160--Hb_002290_020 Hb_000424_040 Hb_000424_040 Hb_001546_160--Hb_000424_040 Hb_001638_310 Hb_001638_310 Hb_001546_160--Hb_001638_310 Hb_000710_090--Hb_143714_010 Hb_003020_060 Hb_003020_060 Hb_000710_090--Hb_003020_060 Hb_011671_190 Hb_011671_190 Hb_000710_090--Hb_011671_190 Hb_003786_080 Hb_003786_080 Hb_000710_090--Hb_003786_080 Hb_000710_090--Hb_000424_040 Hb_099084_010 Hb_099084_010 Hb_000025_610--Hb_099084_010 Hb_000256_040 Hb_000256_040 Hb_000025_610--Hb_000256_040 Hb_000566_050 Hb_000566_050 Hb_000025_610--Hb_000566_050 Hb_000809_020 Hb_000809_020 Hb_000025_610--Hb_000809_020 Hb_001638_330 Hb_001638_330 Hb_000025_610--Hb_001638_330 Hb_003688_040 Hb_003688_040 Hb_000025_610--Hb_003688_040 Hb_000181_410 Hb_000181_410 Hb_000413_290--Hb_000181_410 Hb_001300_100 Hb_001300_100 Hb_000413_290--Hb_001300_100 Hb_010366_010 Hb_010366_010 Hb_000413_290--Hb_010366_010 Hb_007333_030 Hb_007333_030 Hb_000413_290--Hb_007333_030 Hb_005656_030 Hb_005656_030 Hb_000413_290--Hb_005656_030 Hb_000107_470 Hb_000107_470 Hb_000413_290--Hb_000107_470 Hb_003994_310 Hb_003994_310 Hb_143714_010--Hb_003994_310 Hb_143714_010--Hb_011671_190 Hb_001587_170 Hb_001587_170 Hb_143714_010--Hb_001587_170 Hb_000049_220 Hb_000049_220 Hb_143714_010--Hb_000049_220 Hb_132384_010 Hb_132384_010 Hb_087203_010--Hb_132384_010 Hb_012034_010 Hb_012034_010 Hb_087203_010--Hb_012034_010 Hb_011242_020 Hb_011242_020 Hb_087203_010--Hb_011242_020 Hb_002493_010 Hb_002493_010 Hb_087203_010--Hb_002493_010 Hb_033623_040 Hb_033623_040 Hb_087203_010--Hb_033623_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0478583 0.0488926 0.101312 0 0.0138171 0.0258868
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.099158 0 0.0551936

CAGE analysis