Hb_000181_410

Information

Type -
Description -
Location Contig181: 369359-372924
Sequence    

Annotation

kegg
ID rcu:RCOM_0507770
description hypothetical protein
nr
ID XP_002531712.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9T0E3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0507770 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000181_410 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000107_470 0.2008893765 - - cellulose synthase, putative [Ricinus communis]
3 Hb_007603_020 0.2131182516 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
4 Hb_004994_130 0.2190193462 transcription factor TF Family: MYB PREDICTED: myb-like protein M [Jatropha curcas]
5 Hb_000904_130 0.2227966808 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
6 Hb_000152_510 0.230701065 - - kinase, putative [Ricinus communis]
7 Hb_163839_010 0.230863741 - - nucleic acid binding protein, putative [Ricinus communis]
8 Hb_006831_100 0.2322631695 - - snRNA-activating protein complex subunit, putative [Ricinus communis]
9 Hb_010315_070 0.2413913035 - - -
10 Hb_007592_020 0.2428137121 - - acyltransferase, putative [Ricinus communis]
11 Hb_025214_090 0.2503290582 - - clathrin assembly protein, putative [Ricinus communis]
12 Hb_002102_020 0.2520339189 - - PREDICTED: lysine-specific histone demethylase 1 homolog 1 [Jatropha curcas]
13 Hb_001300_100 0.2533544042 - - -
14 Hb_008725_060 0.2570374427 - - Protein COBRA precursor, putative [Ricinus communis]
15 Hb_001807_030 0.2584072247 - - PREDICTED: CDT1-like protein b [Jatropha curcas]
16 Hb_001767_040 0.2586319024 - - dehydroascorbate reductase, putative [Ricinus communis]
17 Hb_185516_010 0.2626468085 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
18 Hb_003119_050 0.2634457637 - - PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Jatropha curcas]
19 Hb_000186_330 0.264205156 - - PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
20 Hb_019715_010 0.2646837991 - - carbon catabolite repressor protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000181_410 Hb_000181_410 Hb_000107_470 Hb_000107_470 Hb_000181_410--Hb_000107_470 Hb_007603_020 Hb_007603_020 Hb_000181_410--Hb_007603_020 Hb_004994_130 Hb_004994_130 Hb_000181_410--Hb_004994_130 Hb_000904_130 Hb_000904_130 Hb_000181_410--Hb_000904_130 Hb_000152_510 Hb_000152_510 Hb_000181_410--Hb_000152_510 Hb_163839_010 Hb_163839_010 Hb_000181_410--Hb_163839_010 Hb_000544_160 Hb_000544_160 Hb_000107_470--Hb_000544_160 Hb_000107_470--Hb_004994_130 Hb_004453_100 Hb_004453_100 Hb_000107_470--Hb_004453_100 Hb_006921_040 Hb_006921_040 Hb_000107_470--Hb_006921_040 Hb_000107_470--Hb_007603_020 Hb_002035_090 Hb_002035_090 Hb_007603_020--Hb_002035_090 Hb_001767_040 Hb_001767_040 Hb_007603_020--Hb_001767_040 Hb_100964_010 Hb_100964_010 Hb_007603_020--Hb_100964_010 Hb_001622_010 Hb_001622_010 Hb_007603_020--Hb_001622_010 Hb_000165_140 Hb_000165_140 Hb_007603_020--Hb_000165_140 Hb_010315_070 Hb_010315_070 Hb_004994_130--Hb_010315_070 Hb_006230_040 Hb_006230_040 Hb_004994_130--Hb_006230_040 Hb_163508_010 Hb_163508_010 Hb_004994_130--Hb_163508_010 Hb_000189_390 Hb_000189_390 Hb_004994_130--Hb_000189_390 Hb_004994_130--Hb_007603_020 Hb_006346_040 Hb_006346_040 Hb_000904_130--Hb_006346_040 Hb_185516_010 Hb_185516_010 Hb_000904_130--Hb_185516_010 Hb_001477_070 Hb_001477_070 Hb_000904_130--Hb_001477_070 Hb_031711_010 Hb_031711_010 Hb_000904_130--Hb_031711_010 Hb_002681_060 Hb_002681_060 Hb_000904_130--Hb_002681_060 Hb_001171_070 Hb_001171_070 Hb_000904_130--Hb_001171_070 Hb_000538_010 Hb_000538_010 Hb_000152_510--Hb_000538_010 Hb_000152_510--Hb_000904_130 Hb_004724_220 Hb_004724_220 Hb_000152_510--Hb_004724_220 Hb_007403_110 Hb_007403_110 Hb_000152_510--Hb_007403_110 Hb_001059_080 Hb_001059_080 Hb_000152_510--Hb_001059_080 Hb_000152_510--Hb_031711_010 Hb_004635_030 Hb_004635_030 Hb_163839_010--Hb_004635_030 Hb_002478_040 Hb_002478_040 Hb_163839_010--Hb_002478_040 Hb_163839_010--Hb_000904_130 Hb_163839_010--Hb_004724_220 Hb_005194_020 Hb_005194_020 Hb_163839_010--Hb_005194_020 Hb_032264_080 Hb_032264_080 Hb_163839_010--Hb_032264_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0609114 0.0770401 0.1165 0.0338071 0.0716844 0.0344695
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0136774 0.0782471 0.0108615 0

CAGE analysis