Hb_000152_510

Information

Type -
Description -
Location Contig152: 436074-443875
Sequence    

Annotation

kegg
ID rcu:RCOM_1499970
description kinase, putative (EC:2.7.11.13)
nr
ID XP_002510928.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9LE81
description Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana GN=IRE PE=2 SV=1
trembl
ID B9R9Q3
description Kinase, putative OS=Ricinus communis GN=RCOM_1499970 PE=4 SV=1
Gene Ontology
ID GO:0004697
description probable serine threonine protein kinase ire

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13010: 442839-443870
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_510 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000538_010 0.1540536188 transcription factor TF Family: MYB-related PREDICTED: protein REVEILLE 1 isoform X2 [Jatropha curcas]
3 Hb_000904_130 0.1717676101 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
4 Hb_004724_220 0.1872391119 - - PREDICTED: probable calcium-binding protein CML48 [Jatropha curcas]
5 Hb_007403_110 0.197187117 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Jatropha curcas]
6 Hb_001059_080 0.1981998453 - - PREDICTED: F-box protein At1g61340-like [Musa acuminata subsp. malaccensis]
7 Hb_031711_010 0.204302187 - - PREDICTED: CDPK-related kinase 4-like isoform X1 [Jatropha curcas]
8 Hb_000163_240 0.2118983883 - - PREDICTED: protein OPI10 homolog [Jatropha curcas]
9 Hb_003228_030 0.2136739763 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
10 Hb_002631_320 0.2140033463 - - hypothetical protein JCGZ_22628 [Jatropha curcas]
11 Hb_001377_360 0.2140107951 transcription factor TF Family: ARF PREDICTED: auxin response factor 18 [Jatropha curcas]
12 Hb_025214_090 0.2161132653 - - clathrin assembly protein, putative [Ricinus communis]
13 Hb_009771_100 0.2162575234 - - PREDICTED: uncharacterized protein LOC105141784 [Populus euphratica]
14 Hb_004336_040 0.218742919 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
15 Hb_013394_060 0.2188917879 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
16 Hb_000187_030 0.2190874491 - - PREDICTED: cyclin-D4-1-like isoform X2 [Jatropha curcas]
17 Hb_004712_170 0.2195608378 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 [Jatropha curcas]
18 Hb_001565_020 0.223264337 - - PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial, partial [Jatropha curcas]
19 Hb_000186_330 0.2233045212 - - PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
20 Hb_012114_050 0.2234605386 - - PREDICTED: uncharacterized protein LOC105645815 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000152_510 Hb_000152_510 Hb_000538_010 Hb_000538_010 Hb_000152_510--Hb_000538_010 Hb_000904_130 Hb_000904_130 Hb_000152_510--Hb_000904_130 Hb_004724_220 Hb_004724_220 Hb_000152_510--Hb_004724_220 Hb_007403_110 Hb_007403_110 Hb_000152_510--Hb_007403_110 Hb_001059_080 Hb_001059_080 Hb_000152_510--Hb_001059_080 Hb_031711_010 Hb_031711_010 Hb_000152_510--Hb_031711_010 Hb_001307_010 Hb_001307_010 Hb_000538_010--Hb_001307_010 Hb_000538_010--Hb_031711_010 Hb_000390_220 Hb_000390_220 Hb_000538_010--Hb_000390_220 Hb_013394_060 Hb_013394_060 Hb_000538_010--Hb_013394_060 Hb_000920_250 Hb_000920_250 Hb_000538_010--Hb_000920_250 Hb_001189_130 Hb_001189_130 Hb_000538_010--Hb_001189_130 Hb_006346_040 Hb_006346_040 Hb_000904_130--Hb_006346_040 Hb_185516_010 Hb_185516_010 Hb_000904_130--Hb_185516_010 Hb_001477_070 Hb_001477_070 Hb_000904_130--Hb_001477_070 Hb_000904_130--Hb_031711_010 Hb_002681_060 Hb_002681_060 Hb_000904_130--Hb_002681_060 Hb_001171_070 Hb_001171_070 Hb_000904_130--Hb_001171_070 Hb_001377_360 Hb_001377_360 Hb_004724_220--Hb_001377_360 Hb_000291_030 Hb_000291_030 Hb_004724_220--Hb_000291_030 Hb_005194_020 Hb_005194_020 Hb_004724_220--Hb_005194_020 Hb_004648_090 Hb_004648_090 Hb_004724_220--Hb_004648_090 Hb_000979_060 Hb_000979_060 Hb_004724_220--Hb_000979_060 Hb_004635_030 Hb_004635_030 Hb_004724_220--Hb_004635_030 Hb_007403_110--Hb_001377_360 Hb_007403_110--Hb_000291_030 Hb_008695_090 Hb_008695_090 Hb_007403_110--Hb_008695_090 Hb_002228_110 Hb_002228_110 Hb_007403_110--Hb_002228_110 Hb_000084_030 Hb_000084_030 Hb_007403_110--Hb_000084_030 Hb_007403_110--Hb_004724_220 Hb_001059_080--Hb_000538_010 Hb_001059_080--Hb_001307_010 Hb_001059_080--Hb_000390_220 Hb_001059_080--Hb_013394_060 Hb_000122_250 Hb_000122_250 Hb_001059_080--Hb_000122_250 Hb_009771_100 Hb_009771_100 Hb_031711_010--Hb_009771_100 Hb_011909_060 Hb_011909_060 Hb_031711_010--Hb_011909_060 Hb_000230_430 Hb_000230_430 Hb_031711_010--Hb_000230_430 Hb_000457_050 Hb_000457_050 Hb_031711_010--Hb_000457_050 Hb_001243_060 Hb_001243_060 Hb_031711_010--Hb_001243_060 Hb_007193_110 Hb_007193_110 Hb_031711_010--Hb_007193_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0290298 0.0994796 0.0602865 0.0266045 0.0775586 0.0192202
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0120207 0.0283791 0.0362893 0.0149937 0

CAGE analysis