Hb_000291_030

Information

Type -
Description -
Location Contig291: 10653-13647
Sequence    

Annotation

kegg
ID egr:104455022
description mitogen-activated protein kinase kinase kinase 1-like
nr
ID XP_010068186.1
description PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Eucalyptus grandis]
swissprot
ID Q8T0S6
description Serine/threonine-protein kinase hippo OS=Drosophila melanogaster GN=hpo PE=1 SV=1
trembl
ID A0A072TDM0
description MAP kinase kinase kinase OS=Medicago truncatula GN=MTR_0685s0020 PE=4 SV=1
Gene Ontology
ID GO:0016301
description mitogen-activated protein kinase kinase kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30489: 6962-13934
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000291_030 0.0 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Eucalyptus grandis]
2 Hb_000011_050 0.0727106767 transcription factor TF Family: MYB PREDICTED: transcription factor GAMYB-like [Jatropha curcas]
3 Hb_002631_320 0.1073397922 - - hypothetical protein JCGZ_22628 [Jatropha curcas]
4 Hb_000579_190 0.1104516147 - - PREDICTED: mitogen-activated protein kinase homolog NTF3 [Jatropha curcas]
5 Hb_000979_060 0.1124424267 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Gossypium raimondii]
6 Hb_004635_030 0.1152178044 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
7 Hb_004236_030 0.1166758058 - - unknown [Lotus japonicus]
8 Hb_001377_360 0.1194817253 transcription factor TF Family: ARF PREDICTED: auxin response factor 18 [Jatropha curcas]
9 Hb_004724_220 0.1218844536 - - PREDICTED: probable calcium-binding protein CML48 [Jatropha curcas]
10 Hb_000375_290 0.1244058298 - - DAG protein, chloroplast precursor, putative [Ricinus communis]
11 Hb_174829_020 0.1270826264 transcription factor TF Family: C2C2-Dof cyclic dof factor 2 [Jatropha curcas]
12 Hb_007403_110 0.1289027632 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Jatropha curcas]
13 Hb_000059_340 0.1304250758 transcription factor TF Family: SOH1 uncharacterized protein LOC100527879 [Glycine max]
14 Hb_002311_480 0.1306305285 - - PREDICTED: condensin-2 complex subunit H2 isoform X2 [Jatropha curcas]
15 Hb_005194_020 0.1320198522 - - PREDICTED: UPF0553 protein-like isoform X1 [Jatropha curcas]
16 Hb_002228_110 0.135496444 - - cytochrome b5 isoform Cb5-B [Vernicia fordii]
17 Hb_008695_090 0.1424326404 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Jatropha curcas]
18 Hb_002107_060 0.1434924258 - - PREDICTED: uncharacterized protein LOC105635312 [Jatropha curcas]
19 Hb_000866_280 0.1459521032 - - PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
20 Hb_000152_150 0.1461051731 - - PREDICTED: uncharacterized protein LOC105648558 [Jatropha curcas]

Gene co-expression network

sample Hb_000291_030 Hb_000291_030 Hb_000011_050 Hb_000011_050 Hb_000291_030--Hb_000011_050 Hb_002631_320 Hb_002631_320 Hb_000291_030--Hb_002631_320 Hb_000579_190 Hb_000579_190 Hb_000291_030--Hb_000579_190 Hb_000979_060 Hb_000979_060 Hb_000291_030--Hb_000979_060 Hb_004635_030 Hb_004635_030 Hb_000291_030--Hb_004635_030 Hb_004236_030 Hb_004236_030 Hb_000291_030--Hb_004236_030 Hb_000925_030 Hb_000925_030 Hb_000011_050--Hb_000925_030 Hb_000363_350 Hb_000363_350 Hb_000011_050--Hb_000363_350 Hb_000011_050--Hb_000979_060 Hb_174829_020 Hb_174829_020 Hb_000011_050--Hb_174829_020 Hb_002311_480 Hb_002311_480 Hb_000011_050--Hb_002311_480 Hb_004204_050 Hb_004204_050 Hb_002631_320--Hb_004204_050 Hb_002631_320--Hb_004635_030 Hb_002478_040 Hb_002478_040 Hb_002631_320--Hb_002478_040 Hb_001377_360 Hb_001377_360 Hb_002631_320--Hb_001377_360 Hb_002631_320--Hb_000011_050 Hb_001005_020 Hb_001005_020 Hb_000579_190--Hb_001005_020 Hb_000375_290 Hb_000375_290 Hb_000579_190--Hb_000375_290 Hb_001558_060 Hb_001558_060 Hb_000579_190--Hb_001558_060 Hb_000579_190--Hb_004236_030 Hb_004943_030 Hb_004943_030 Hb_000579_190--Hb_004943_030 Hb_008695_090 Hb_008695_090 Hb_000579_190--Hb_008695_090 Hb_000684_100 Hb_000684_100 Hb_000979_060--Hb_000684_100 Hb_005194_020 Hb_005194_020 Hb_000979_060--Hb_005194_020 Hb_000979_060--Hb_002311_480 Hb_000009_220 Hb_000009_220 Hb_000979_060--Hb_000009_220 Hb_001322_020 Hb_001322_020 Hb_000979_060--Hb_001322_020 Hb_000979_060--Hb_000579_190 Hb_004635_030--Hb_002478_040 Hb_004635_030--Hb_005194_020 Hb_006538_130 Hb_006538_130 Hb_004635_030--Hb_006538_130 Hb_004635_030--Hb_008695_090 Hb_001477_070 Hb_001477_070 Hb_004635_030--Hb_001477_070 Hb_006132_040 Hb_006132_040 Hb_004236_030--Hb_006132_040 Hb_004236_030--Hb_001558_060 Hb_000890_010 Hb_000890_010 Hb_004236_030--Hb_000890_010 Hb_004236_030--Hb_000375_290 Hb_002107_060 Hb_002107_060 Hb_004236_030--Hb_002107_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.8493 69.4692 86.2988 16.8959 21.5051 19.508
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.0012 35.744 17.8338 16.934 8.2442

CAGE analysis