Hb_185516_010

Information

Type -
Description -
Location Contig185516: 750-1591
Sequence    

Annotation

kegg
ID rcu:RCOM_1507860
description Protein bem46, putative
nr
ID XP_012079940.1
description PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
swissprot
ID Q5ZJ01
description Alpha/beta hydrolase domain-containing protein 17B OS=Gallus gallus GN=ABHD17B PE=2 SV=1
trembl
ID A0A067KFF7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11376 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185516_010 0.0 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
2 Hb_000336_110 0.1136199235 - - Uracil phosphoribosyltransferase, putative [Ricinus communis]
3 Hb_001269_200 0.1142802448 - - pentatricopeptide repeat-containing family protein [Populus trichocarpa]
4 Hb_000211_120 0.1144598769 - - PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
5 Hb_001807_010 0.1189428018 - - hypothetical protein MTR_6g077630 [Medicago truncatula]
6 Hb_000139_190 0.1193417609 transcription factor TF Family: TRAF PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2 isoform X2 [Jatropha curcas]
7 Hb_014361_150 0.1216179417 - - PREDICTED: uncharacterized protein LOC105639827 [Jatropha curcas]
8 Hb_001477_070 0.1217622489 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000407_040 0.122030429 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]
10 Hb_008695_090 0.1241202813 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Jatropha curcas]
11 Hb_000983_120 0.1241507036 - - cyclin-dependent protein kinase, putative [Ricinus communis]
12 Hb_031711_010 0.1300503976 - - PREDICTED: CDPK-related kinase 4-like isoform X1 [Jatropha curcas]
13 Hb_000579_190 0.1302989319 - - PREDICTED: mitogen-activated protein kinase homolog NTF3 [Jatropha curcas]
14 Hb_000363_280 0.1305263993 transcription factor TF Family: SWI/SNF-BAF60b PREDICTED: angiomotin [Cucumis sativus]
15 Hb_039605_010 0.1329048063 - - PREDICTED: lysine-specific demethylase JMJ25 isoform X1 [Jatropha curcas]
16 Hb_004236_030 0.1371416318 - - unknown [Lotus japonicus]
17 Hb_000186_330 0.1372040811 - - PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
18 Hb_003228_030 0.1377695406 - - PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Jatropha curcas]
19 Hb_000563_330 0.1380405293 - - DAG protein, chloroplast precursor, putative [Ricinus communis]
20 Hb_003086_190 0.1380781032 - - PREDICTED: uncharacterized protein LOC105635794 [Jatropha curcas]

Gene co-expression network

sample Hb_185516_010 Hb_185516_010 Hb_000336_110 Hb_000336_110 Hb_185516_010--Hb_000336_110 Hb_001269_200 Hb_001269_200 Hb_185516_010--Hb_001269_200 Hb_000211_120 Hb_000211_120 Hb_185516_010--Hb_000211_120 Hb_001807_010 Hb_001807_010 Hb_185516_010--Hb_001807_010 Hb_000139_190 Hb_000139_190 Hb_185516_010--Hb_000139_190 Hb_014361_150 Hb_014361_150 Hb_185516_010--Hb_014361_150 Hb_000264_080 Hb_000264_080 Hb_000336_110--Hb_000264_080 Hb_000363_280 Hb_000363_280 Hb_000336_110--Hb_000363_280 Hb_000120_420 Hb_000120_420 Hb_000336_110--Hb_000120_420 Hb_009771_100 Hb_009771_100 Hb_000336_110--Hb_009771_100 Hb_167381_020 Hb_167381_020 Hb_000336_110--Hb_167381_020 Hb_000069_590 Hb_000069_590 Hb_000336_110--Hb_000069_590 Hb_016734_090 Hb_016734_090 Hb_001269_200--Hb_016734_090 Hb_000563_330 Hb_000563_330 Hb_001269_200--Hb_000563_330 Hb_011918_050 Hb_011918_050 Hb_001269_200--Hb_011918_050 Hb_039605_010 Hb_039605_010 Hb_001269_200--Hb_039605_010 Hb_002739_130 Hb_002739_130 Hb_001269_200--Hb_002739_130 Hb_006452_160 Hb_006452_160 Hb_001269_200--Hb_006452_160 Hb_000211_120--Hb_000336_110 Hb_000211_120--Hb_000264_080 Hb_005355_030 Hb_005355_030 Hb_000211_120--Hb_005355_030 Hb_000282_030 Hb_000282_030 Hb_000211_120--Hb_000282_030 Hb_000061_490 Hb_000061_490 Hb_000211_120--Hb_000061_490 Hb_002928_010 Hb_002928_010 Hb_001807_010--Hb_002928_010 Hb_001807_010--Hb_001269_200 Hb_001807_010--Hb_000139_190 Hb_001807_010--Hb_039605_010 Hb_000416_050 Hb_000416_050 Hb_001807_010--Hb_000416_050 Hb_004631_190 Hb_004631_190 Hb_001807_010--Hb_004631_190 Hb_027073_030 Hb_027073_030 Hb_000139_190--Hb_027073_030 Hb_010998_040 Hb_010998_040 Hb_000139_190--Hb_010998_040 Hb_000139_190--Hb_039605_010 Hb_032264_060 Hb_032264_060 Hb_000139_190--Hb_032264_060 Hb_010362_030 Hb_010362_030 Hb_000139_190--Hb_010362_030 Hb_000287_050 Hb_000287_050 Hb_000139_190--Hb_000287_050 Hb_000260_440 Hb_000260_440 Hb_014361_150--Hb_000260_440 Hb_002379_050 Hb_002379_050 Hb_014361_150--Hb_002379_050 Hb_004357_020 Hb_004357_020 Hb_014361_150--Hb_004357_020 Hb_000760_020 Hb_000760_020 Hb_014361_150--Hb_000760_020 Hb_000125_200 Hb_000125_200 Hb_014361_150--Hb_000125_200 Hb_005306_160 Hb_005306_160 Hb_014361_150--Hb_005306_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
82.7543 91.4037 92.1386 35.6185 44.7305 40.4227
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
27.973 25.0842 30.8084 18.69 11.1972

CAGE analysis