Hb_167381_020

Information

Type -
Description -
Location Contig167381: 4078-4275
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023841mg
description hypothetical protein
nr
ID XP_012092941.1
description PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JKQ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05838 PE=4 SV=1
Gene Ontology
ID GO:0005634
description nuclear-interacting partner of alk

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167381_020 0.0 - - PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
2 Hb_001307_010 0.0819395866 - - PREDICTED: uncharacterized protein LOC103939917 [Pyrus x bretschneideri]
3 Hb_000116_510 0.0862163144 - - PREDICTED: RNA-binding protein 24-A-like isoform X2 [Jatropha curcas]
4 Hb_000120_420 0.0864704275 - - PREDICTED: AT-rich interactive domain-containing protein 5-like [Jatropha curcas]
5 Hb_118840_050 0.089620583 - - hypothetical protein CISIN_1g0019781mg, partial [Citrus sinensis]
6 Hb_000336_110 0.0922751124 - - Uracil phosphoribosyltransferase, putative [Ricinus communis]
7 Hb_011909_060 0.0940038028 - - PREDICTED: zinc finger protein CONSTANS-LIKE 1 [Jatropha curcas]
8 Hb_008406_040 0.0949377713 - - -
9 Hb_000264_080 0.0979768383 - - hypothetical protein JCGZ_21412 [Jatropha curcas]
10 Hb_000422_110 0.0991234111 - - PREDICTED: uncharacterized protein At1g08160-like [Jatropha curcas]
11 Hb_002902_020 0.0994487558 - - PREDICTED: uncharacterized protein LOC105639827 [Jatropha curcas]
12 Hb_000230_430 0.1006890076 - - catalytic, putative [Ricinus communis]
13 Hb_013749_020 0.1029001397 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
14 Hb_001243_060 0.1059586989 - - PREDICTED: probable magnesium transporter NIPA6 [Jatropha curcas]
15 Hb_009771_100 0.1059595872 - - PREDICTED: uncharacterized protein LOC105141784 [Populus euphratica]
16 Hb_000363_280 0.1061126742 transcription factor TF Family: SWI/SNF-BAF60b PREDICTED: angiomotin [Cucumis sativus]
17 Hb_000024_120 0.1077395174 - - PREDICTED: uncharacterized protein LOC105122546 isoform X1 [Populus euphratica]
18 Hb_000625_120 0.1082760762 - - PREDICTED: calcium-dependent protein kinase 28 [Jatropha curcas]
19 Hb_005333_030 0.1086015902 - - hypothetical protein JCGZ_15866 [Jatropha curcas]
20 Hb_000345_490 0.1087618806 - - PREDICTED: mitochondrial Rho GTPase 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_167381_020 Hb_167381_020 Hb_001307_010 Hb_001307_010 Hb_167381_020--Hb_001307_010 Hb_000116_510 Hb_000116_510 Hb_167381_020--Hb_000116_510 Hb_000120_420 Hb_000120_420 Hb_167381_020--Hb_000120_420 Hb_118840_050 Hb_118840_050 Hb_167381_020--Hb_118840_050 Hb_000336_110 Hb_000336_110 Hb_167381_020--Hb_000336_110 Hb_011909_060 Hb_011909_060 Hb_167381_020--Hb_011909_060 Hb_000422_110 Hb_000422_110 Hb_001307_010--Hb_000422_110 Hb_031711_010 Hb_031711_010 Hb_001307_010--Hb_031711_010 Hb_009771_100 Hb_009771_100 Hb_001307_010--Hb_009771_100 Hb_001307_010--Hb_011909_060 Hb_001454_220 Hb_001454_220 Hb_001307_010--Hb_001454_220 Hb_000024_120 Hb_000024_120 Hb_000116_510--Hb_000024_120 Hb_008406_040 Hb_008406_040 Hb_000116_510--Hb_008406_040 Hb_000345_490 Hb_000345_490 Hb_000116_510--Hb_000345_490 Hb_009449_090 Hb_009449_090 Hb_000116_510--Hb_009449_090 Hb_000116_510--Hb_001454_220 Hb_000120_420--Hb_011909_060 Hb_000363_280 Hb_000363_280 Hb_000120_420--Hb_000363_280 Hb_000227_310 Hb_000227_310 Hb_000120_420--Hb_000227_310 Hb_000264_080 Hb_000264_080 Hb_000120_420--Hb_000264_080 Hb_003430_030 Hb_003430_030 Hb_000120_420--Hb_003430_030 Hb_000917_160 Hb_000917_160 Hb_118840_050--Hb_000917_160 Hb_000191_130 Hb_000191_130 Hb_118840_050--Hb_000191_130 Hb_000062_470 Hb_000062_470 Hb_118840_050--Hb_000062_470 Hb_000577_030 Hb_000577_030 Hb_118840_050--Hb_000577_030 Hb_000230_430 Hb_000230_430 Hb_118840_050--Hb_000230_430 Hb_001047_200 Hb_001047_200 Hb_118840_050--Hb_001047_200 Hb_000336_110--Hb_000264_080 Hb_000336_110--Hb_000363_280 Hb_000336_110--Hb_000120_420 Hb_000336_110--Hb_009771_100 Hb_000069_590 Hb_000069_590 Hb_000336_110--Hb_000069_590 Hb_011909_060--Hb_000363_280 Hb_011909_060--Hb_009771_100 Hb_011909_060--Hb_031711_010 Hb_001141_370 Hb_001141_370 Hb_011909_060--Hb_001141_370 Hb_002997_160 Hb_002997_160 Hb_011909_060--Hb_002997_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
72.5784 153.754 81.4404 52.1461 106.096 92.5599
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.5397 28.612 14.725 41.8473 26.0131

CAGE analysis