Hb_010315_070

Information

Type -
Description -
Location Contig10315: 71847-72495
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010315_070 0.0 - - -
2 Hb_004994_130 0.1713078316 transcription factor TF Family: MYB PREDICTED: myb-like protein M [Jatropha curcas]
3 Hb_002370_040 0.2128725723 - - PREDICTED: uncharacterized protein LOC105644336 [Jatropha curcas]
4 Hb_100964_010 0.2300451172 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_007603_020 0.2404971614 - - PREDICTED: leucine-rich repeat receptor protein kinase MSP1-like [Jatropha curcas]
6 Hb_000181_410 0.2413913035 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000101_220 0.2422670458 - - anthranilate synthase component I, putative [Ricinus communis]
8 Hb_006230_040 0.242402682 - - kinase, putative [Ricinus communis]
9 Hb_004570_050 0.2482398726 - - kinase, putative [Ricinus communis]
10 Hb_007481_030 0.2508280193 - - PREDICTED: uncharacterized protein LOC105628433 [Jatropha curcas]
11 Hb_001442_030 0.2511333331 - - Peroxisome biogenesis factor [Medicago truncatula]
12 Hb_007223_010 0.2568843084 - - conserved hypothetical protein [Ricinus communis]
13 Hb_164458_010 0.2577159256 - - PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic isoform X2 [Jatropha curcas]
14 Hb_001807_030 0.2592222343 - - PREDICTED: CDT1-like protein b [Jatropha curcas]
15 Hb_000165_140 0.2596085244 - - PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270 isoform X2 [Populus euphratica]
16 Hb_000045_320 0.2617202802 - - PREDICTED: uncharacterized protein LOC105646630 isoform X1 [Jatropha curcas]
17 Hb_007137_060 0.2622750167 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]
18 Hb_102632_010 0.2631241681 - - PREDICTED: CST complex subunit STN1 [Jatropha curcas]
19 Hb_118720_010 0.2642110711 - - PREDICTED: uncharacterized protein LOC105634948 [Jatropha curcas]
20 Hb_000021_020 0.266517947 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Malus domestica]

Gene co-expression network

sample Hb_010315_070 Hb_010315_070 Hb_004994_130 Hb_004994_130 Hb_010315_070--Hb_004994_130 Hb_002370_040 Hb_002370_040 Hb_010315_070--Hb_002370_040 Hb_100964_010 Hb_100964_010 Hb_010315_070--Hb_100964_010 Hb_007603_020 Hb_007603_020 Hb_010315_070--Hb_007603_020 Hb_000181_410 Hb_000181_410 Hb_010315_070--Hb_000181_410 Hb_000101_220 Hb_000101_220 Hb_010315_070--Hb_000101_220 Hb_004994_130--Hb_000181_410 Hb_006230_040 Hb_006230_040 Hb_004994_130--Hb_006230_040 Hb_163508_010 Hb_163508_010 Hb_004994_130--Hb_163508_010 Hb_000189_390 Hb_000189_390 Hb_004994_130--Hb_000189_390 Hb_004994_130--Hb_007603_020 Hb_007481_030 Hb_007481_030 Hb_002370_040--Hb_007481_030 Hb_012395_080 Hb_012395_080 Hb_002370_040--Hb_012395_080 Hb_003895_030 Hb_003895_030 Hb_002370_040--Hb_003895_030 Hb_000136_190 Hb_000136_190 Hb_002370_040--Hb_000136_190 Hb_007223_010 Hb_007223_010 Hb_002370_040--Hb_007223_010 Hb_100525_010 Hb_100525_010 Hb_002370_040--Hb_100525_010 Hb_002929_130 Hb_002929_130 Hb_100964_010--Hb_002929_130 Hb_002035_090 Hb_002035_090 Hb_100964_010--Hb_002035_090 Hb_100964_010--Hb_007603_020 Hb_114984_010 Hb_114984_010 Hb_100964_010--Hb_114984_010 Hb_138600_010 Hb_138600_010 Hb_100964_010--Hb_138600_010 Hb_050686_010 Hb_050686_010 Hb_100964_010--Hb_050686_010 Hb_007603_020--Hb_002035_090 Hb_001767_040 Hb_001767_040 Hb_007603_020--Hb_001767_040 Hb_007603_020--Hb_000181_410 Hb_001622_010 Hb_001622_010 Hb_007603_020--Hb_001622_010 Hb_000165_140 Hb_000165_140 Hb_007603_020--Hb_000165_140 Hb_000107_470 Hb_000107_470 Hb_000181_410--Hb_000107_470 Hb_000904_130 Hb_000904_130 Hb_000181_410--Hb_000904_130 Hb_000152_510 Hb_000152_510 Hb_000181_410--Hb_000152_510 Hb_163839_010 Hb_163839_010 Hb_000181_410--Hb_163839_010 Hb_046198_020 Hb_046198_020 Hb_000101_220--Hb_046198_020 Hb_001195_190 Hb_001195_190 Hb_000101_220--Hb_001195_190 Hb_007137_060 Hb_007137_060 Hb_000101_220--Hb_007137_060 Hb_000905_150 Hb_000905_150 Hb_000101_220--Hb_000905_150 Hb_013394_060 Hb_013394_060 Hb_000101_220--Hb_013394_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.166571 0.344698 0.41101 0.101081 0.315527 0.39956
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.149102 0.106105 0

CAGE analysis