Hb_000136_190

Information

Type -
Description -
Location Contig136: 145943-146749
Sequence    

Annotation

kegg
ID fve:101310986
description protein-S-isoprenylcysteine O-methyltransferase B-like isoform 1
nr
ID XP_012090864.1
description PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
swissprot
ID Q93W54
description Protein-S-isoprenylcysteine O-methyltransferase B OS=Arabidopsis thaliana GN=ICMTB PE=1 SV=1
trembl
ID A0A067JPH3
description Protein-S-isoprenylcysteine O-methyltransferase OS=Jatropha curcas GN=JCGZ_03053 PE=3 SV=1
Gene Ontology
ID GO:0005789
description protein-s-isoprenylcysteine o-methyltransferase a-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10010: 145636-148366
cDNA
(Sanger)
(ID:Location)		 028_E05.ab1: 146070-148359

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000136_190 0.0 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
2 Hb_003814_030 0.1035010848 - - PREDICTED: WAT1-related protein At5g47470-like isoform X2 [Jatropha curcas]
3 Hb_002370_040 0.1538070952 - - PREDICTED: uncharacterized protein LOC105644336 [Jatropha curcas]
4 Hb_000330_160 0.1556351139 - - hypothetical protein JCGZ_04462 [Jatropha curcas]
5 Hb_000062_060 0.1568788549 transcription factor TF Family: Orphans multi-sensor hybrid histidine kinase [Plautia stali symbiont]
6 Hb_001508_020 0.1703778661 - - myosin vIII, putative [Ricinus communis]
7 Hb_004657_090 0.1723665463 - - Chromosome-associated kinesin KLP1, putative [Ricinus communis]
8 Hb_004935_080 0.1737609826 - - AT3g13060/MGH6_17 [Arabidopsis thaliana]
9 Hb_008029_020 0.1743943365 - - PREDICTED: uncharacterized protein LOC105631777 [Jatropha curcas]
10 Hb_005144_030 0.1749375357 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
11 Hb_012395_080 0.1793276848 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Jatropha curcas]
12 Hb_003376_260 0.1796805415 - - PREDICTED: uncharacterized protein LOC105642207 isoform X1 [Jatropha curcas]
13 Hb_144550_020 0.1828120963 - - -
14 Hb_009119_030 0.1877947841 - - GMFP4 [Medicago truncatula]
15 Hb_003895_030 0.1883279043 - - -
16 Hb_002742_070 0.1889981931 - - PREDICTED: villin-4-like [Jatropha curcas]
17 Hb_003854_020 0.1897245352 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
18 Hb_121467_010 0.1897339412 - - tubulin-specific chaperone E, putative [Ricinus communis]
19 Hb_169329_010 0.1899180672 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X2 [Jatropha curcas]
20 Hb_007481_030 0.1919862707 - - PREDICTED: uncharacterized protein LOC105628433 [Jatropha curcas]

Gene co-expression network

sample Hb_000136_190 Hb_000136_190 Hb_003814_030 Hb_003814_030 Hb_000136_190--Hb_003814_030 Hb_002370_040 Hb_002370_040 Hb_000136_190--Hb_002370_040 Hb_000330_160 Hb_000330_160 Hb_000136_190--Hb_000330_160 Hb_000062_060 Hb_000062_060 Hb_000136_190--Hb_000062_060 Hb_001508_020 Hb_001508_020 Hb_000136_190--Hb_001508_020 Hb_004657_090 Hb_004657_090 Hb_000136_190--Hb_004657_090 Hb_003814_030--Hb_000330_160 Hb_003814_030--Hb_001508_020 Hb_003814_030--Hb_004657_090 Hb_005144_030 Hb_005144_030 Hb_003814_030--Hb_005144_030 Hb_006508_030 Hb_006508_030 Hb_003814_030--Hb_006508_030 Hb_007481_030 Hb_007481_030 Hb_002370_040--Hb_007481_030 Hb_012395_080 Hb_012395_080 Hb_002370_040--Hb_012395_080 Hb_003895_030 Hb_003895_030 Hb_002370_040--Hb_003895_030 Hb_007223_010 Hb_007223_010 Hb_002370_040--Hb_007223_010 Hb_100525_010 Hb_100525_010 Hb_002370_040--Hb_100525_010 Hb_000330_160--Hb_005144_030 Hb_002742_070 Hb_002742_070 Hb_000330_160--Hb_002742_070 Hb_011953_030 Hb_011953_030 Hb_000330_160--Hb_011953_030 Hb_001031_040 Hb_001031_040 Hb_000330_160--Hb_001031_040 Hb_037793_010 Hb_037793_010 Hb_000062_060--Hb_037793_010 Hb_000062_060--Hb_005144_030 Hb_011206_010 Hb_011206_010 Hb_000062_060--Hb_011206_010 Hb_000062_060--Hb_001508_020 Hb_002815_060 Hb_002815_060 Hb_000062_060--Hb_002815_060 Hb_003529_130 Hb_003529_130 Hb_001508_020--Hb_003529_130 Hb_010925_020 Hb_010925_020 Hb_001508_020--Hb_010925_020 Hb_001369_350 Hb_001369_350 Hb_001508_020--Hb_001369_350 Hb_000021_020 Hb_000021_020 Hb_001508_020--Hb_000021_020 Hb_003894_040 Hb_003894_040 Hb_001508_020--Hb_003894_040 Hb_018202_050 Hb_018202_050 Hb_001508_020--Hb_018202_050 Hb_004657_090--Hb_001508_020 Hb_003376_260 Hb_003376_260 Hb_004657_090--Hb_003376_260 Hb_002681_170 Hb_002681_170 Hb_004657_090--Hb_002681_170 Hb_004374_080 Hb_004374_080 Hb_004657_090--Hb_004374_080 Hb_000091_060 Hb_000091_060 Hb_004657_090--Hb_000091_060 Hb_012404_070 Hb_012404_070 Hb_004657_090--Hb_012404_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.3991 33.9945 30.5795 48.7083 38.6042 84.9136
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.30339 1.36637 1.74193 20.7329 12.6162

CAGE analysis