Hb_000905_150

Information

Type -
Description -
Location Contig905: 160896-162511
Sequence    

Annotation

kegg
ID tcc:TCM_032794
description Cytochrome P450
nr
ID XP_007022414.1
description Cytochrome P450 [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061FHI8
description Cytochrome P450 OS=Theobroma cacao GN=TCM_032794 PE=3 SV=1
Gene Ontology
ID GO:0016491
description cytochrome p450

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62004: 149650-162688
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000905_150 0.0 - - Cytochrome P450 [Theobroma cacao]
2 Hb_005510_010 0.2392779618 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Jatropha curcas]
3 Hb_000181_440 0.2620716616 - - -
4 Hb_003096_040 0.2652125075 transcription factor TF Family: HB hypothetical protein POPTR_0005s07290g [Populus trichocarpa]
5 Hb_007101_220 0.2750664186 - - Gibberellin-regulated protein 3 precursor, putative [Ricinus communis]
6 Hb_000101_220 0.2759552102 - - anthranilate synthase component I, putative [Ricinus communis]
7 Hb_003656_120 0.2812503956 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-3-like [Jatropha curcas]
8 Hb_031527_070 0.2861919107 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]
9 Hb_000061_380 0.2865867208 - - conserved hypothetical protein [Ricinus communis]
10 Hb_010565_020 0.288424692 - - -
11 Hb_020178_060 0.2895373068 - - PREDICTED: nucleobase-ascorbate transporter 3 [Jatropha curcas]
12 Hb_001477_040 0.2907235033 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
13 Hb_000206_130 0.2960422286 - - unnamed protein product [Vitis vinifera]
14 Hb_005608_010 0.2981237155 - - PREDICTED: U-box domain-containing protein 40 [Jatropha curcas]
15 Hb_011468_010 0.298570288 - - hypothetical protein B456_008G198600 [Gossypium raimondii]
16 Hb_000237_130 0.2986706871 - - -
17 Hb_018118_050 0.2989985759 - - hypothetical protein POPTR_0006s07370g [Populus trichocarpa]
18 Hb_002609_090 0.2994215268 - - PREDICTED: phosphomethylpyrimidine synthase, chloroplastic isoform X2 [Jatropha curcas]
19 Hb_000046_230 0.301015851 - - PREDICTED: chromatin structure-remodeling complex protein SYD-like [Jatropha curcas]
20 Hb_046198_020 0.3010485861 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000905_150 Hb_000905_150 Hb_005510_010 Hb_005510_010 Hb_000905_150--Hb_005510_010 Hb_000181_440 Hb_000181_440 Hb_000905_150--Hb_000181_440 Hb_003096_040 Hb_003096_040 Hb_000905_150--Hb_003096_040 Hb_007101_220 Hb_007101_220 Hb_000905_150--Hb_007101_220 Hb_000101_220 Hb_000101_220 Hb_000905_150--Hb_000101_220 Hb_003656_120 Hb_003656_120 Hb_000905_150--Hb_003656_120 Hb_057451_010 Hb_057451_010 Hb_005510_010--Hb_057451_010 Hb_018133_030 Hb_018133_030 Hb_005510_010--Hb_018133_030 Hb_009028_030 Hb_009028_030 Hb_005510_010--Hb_009028_030 Hb_001522_010 Hb_001522_010 Hb_005510_010--Hb_001522_010 Hb_003157_010 Hb_003157_010 Hb_005510_010--Hb_003157_010 Hb_000720_070 Hb_000720_070 Hb_005510_010--Hb_000720_070 Hb_028795_010 Hb_028795_010 Hb_000181_440--Hb_028795_010 Hb_000181_440--Hb_003096_040 Hb_179679_010 Hb_179679_010 Hb_000181_440--Hb_179679_010 Hb_010261_010 Hb_010261_010 Hb_000181_440--Hb_010261_010 Hb_033926_010 Hb_033926_010 Hb_000181_440--Hb_033926_010 Hb_003633_140 Hb_003633_140 Hb_000181_440--Hb_003633_140 Hb_031527_070 Hb_031527_070 Hb_003096_040--Hb_031527_070 Hb_003096_040--Hb_010261_010 Hb_153161_010 Hb_153161_010 Hb_003096_040--Hb_153161_010 Hb_000175_350 Hb_000175_350 Hb_003096_040--Hb_000175_350 Hb_178127_010 Hb_178127_010 Hb_003096_040--Hb_178127_010 Hb_003096_040--Hb_005510_010 Hb_006810_070 Hb_006810_070 Hb_007101_220--Hb_006810_070 Hb_030827_050 Hb_030827_050 Hb_007101_220--Hb_030827_050 Hb_003117_050 Hb_003117_050 Hb_007101_220--Hb_003117_050 Hb_003238_030 Hb_003238_030 Hb_007101_220--Hb_003238_030 Hb_151497_010 Hb_151497_010 Hb_007101_220--Hb_151497_010 Hb_046198_020 Hb_046198_020 Hb_000101_220--Hb_046198_020 Hb_001195_190 Hb_001195_190 Hb_000101_220--Hb_001195_190 Hb_010315_070 Hb_010315_070 Hb_000101_220--Hb_010315_070 Hb_007137_060 Hb_007137_060 Hb_000101_220--Hb_007137_060 Hb_013394_060 Hb_013394_060 Hb_000101_220--Hb_013394_060 Hb_009848_030 Hb_009848_030 Hb_003656_120--Hb_009848_030 Hb_000504_090 Hb_000504_090 Hb_003656_120--Hb_000504_090 Hb_003656_120--Hb_005510_010 Hb_001396_260 Hb_001396_260 Hb_003656_120--Hb_001396_260 Hb_011639_010 Hb_011639_010 Hb_003656_120--Hb_011639_010 Hb_000032_310 Hb_000032_310 Hb_003656_120--Hb_000032_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.06972 4.98795 1.21008 0.835141 8.57758 1.24156
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.39445 0 0.0936765 3.51281 0

CAGE analysis